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    E13L3 glucan endo-1,3-beta-glucosidase-like protein 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830694, updated on 18-Sep-2024

    Summary

    Official Symbol
    E13L3
    Official Full Name
    glucan endo-1,3-beta-glucosidase-like protein 3
    Primary source
    TAIR:AT5G08000
    Locus tag
    AT5G08000
    See related
    Araport:AT5G08000
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ''glucan endo-1; 3-beta-glucosidase-like protein 3; 3-beta-glucosidase-like protein 3''; F13G24.200; F13G24_200; glucan endo-1; PDCB2; PLASMODESMATA CALLOSE-BINDING PROTEIN 2
    Summary
    Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and binds callose.
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    Genomic context

    See E13L3 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    4
    Sequence:
    Chromosome: 5; NC_003076.8 (2563366..2565547)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene dentin sialophosphoprotein-like protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Cytochrome P450 superfamily protein Neighboring gene flavonoid protein Neighboring gene uncharacterized protein

    Bibliography

    General gene information

    NM_120882.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables (1->3)-beta-D-glucan binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables polysaccharide binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in response to heat IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in membrane TAS
    Traceable Author Statement
    more info
    PubMed 
    located_in plasma membrane HDA PubMed 
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
     
    located_in plasmodesma IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    glucan endo-1,3-beta-glucosidase-like protein 3
    NP_196417.1
    • ''glucan endo-1,3-beta-glucosidase-like protein 3'' (E13L3); FUNCTIONS IN: callose binding, polysaccharide binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasmodesma, anchored to plasma membrane, anchored to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: plasmodesmata callose-binding protein 1 (TAIR:AT5G61130.1); Has 1582 Blast hits to 1532 proteins in 101 species: Archae - 0; Bacteria - 6; Metazoa - 10; Fungi - 147; Plants - 1404; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      2563366..2565547
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001342974.1NP_001332606.1  glucan endo-1,3-beta-glucosidase-like protein 3 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BHI7, A0A5S9Y336, A0A654FZB1
    2. NM_120882.4NP_196417.1  glucan endo-1,3-beta-glucosidase-like protein 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_196417.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LBE9, Q9SD84
      UniProtKB/TrEMBL
      A0A654FZB1
      Conserved Domains (1) summary
      smart00768
      Location:20104
      X8; Possibly involved in carbohydrate binding