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    OFP3 ovate family protein 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835948, updated on 18-Sep-2024

    Summary

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    Official Symbol
    OFP3
    Official Full Name
    ovate family protein 3
    Primary source
    TAIR:AT5G58360
    Locus tag
    AT5G58360
    See related
    Araport:AT5G58360
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 3; ATOFP3; MCK7.23; MCK7_23; ovate family protein 3
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    Genomic context

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    See OFP3 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    1
    Sequence:
    Chromosome: 5; NC_003076.8 (23589550..23591197, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Kinase interacting (KIP1-like) family protein Neighboring gene lactate/malate dehydrogenase family protein Neighboring gene myb-like HTH transcriptional regulator family protein Neighboring gene with no lysine (K) kinase 4 Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein Neighboring gene Methyltransferase-related protein Neighboring gene SOS3-interacting protein 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis ovate family proteins, a novel transcriptional repressor family, control multiple aspects of plant growth and development. Wang S, et al. PLoS One, 2011. PMID 21886836, Free PMC Article
    2. A central role of Arabidopsis thaliana ovate family proteins in networking and subcellular localization of 3-aa loop extension homeodomain proteins. Hackbusch J, et al. Proc Natl Acad Sci U S A, 2005 Mar 29. PMID 15781858, Free PMC Article
    3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within negative regulation of DNA-templated transcription IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    ovate family protein 3
    NP_200644.1
    • ovate family protein 3 (OFP3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 4 (TAIR:AT1G06920.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      23589550..23591197 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_125221.2 → NP_200644.1  ovate family protein 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_200644.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LVL4
      UniProtKB/TrEMBL
      A0A178UD51, A0A5S9YFM8, A0A654GCE0
      Conserved Domains (2) summary
      pfam04844
      Location:232 → 288
      Ovate; Transcriptional repressor, ovate
      pfam13724
      Location:5 → 55
      DNA_binding_2; DNA-binding domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LVL4.1

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