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    GIL1 glucose-6-phosphate isomerase, putative (DUF641) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836013, updated on 1-Nov-2024

    Summary

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    Official Symbol
    GIL1
    Official Full Name
    glucose-6-phosphate isomerase, putative (DUF641)
    Primary source
    TAIR:AT5G58960
    Locus tag
    AT5G58960
    See related
    Araport:AT5G58960
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    GRAVITROPIC IN THE LIGHT; K19M22.15; K19M22_15
    Summary
    Mutant plants display impaired light-regulation of the hypocotyl randomization response.
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    Genomic context

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    See GIL1 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    3
    Sequence:
    Chromosome: 5; NC_003076.8 (23805717..23808478)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene hypothetical protein (DUF740) Neighboring gene calmodulin-binding receptor-like cytoplasmic kinase 1 Neighboring gene Protein kinase superfamily protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene uncoupling protein 2 Neighboring gene Neutral/alkaline non-lysosomal ceramidase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Light-stabilized GIL1 suppresses PIN3 activity to inhibit hypocotyl gravitropism. Wang X, et al. J Integr Plant Biol, 2024 Sep. PMID 38990128
    2. Phytochrome-mediated agravitropism in Arabidopsis hypocotyls requires GIL1 and confers a fitness advantage. Allen T, et al. Plant J, 2006 May. PMID 16640600
    3. Extensive signal integration by the phytohormone protein network. Altmann M, et al. Nature, 2020 Jul. PMID 32612234
    4. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Light-stabilized GIL1 suppresses PIN3 activity to inhibit hypocotyl gravitropism.
      Title: Light-stabilized GIL1 suppresses PIN3 activity to inhibit hypocotyl gravitropism.
    2. GIL1 is necessary for light-dependent randomization of hypocotyl growth orientation in Arabidopsis.
      Title: Phytochrome-mediated agravitropism in Arabidopsis hypocotyls requires GIL1 and confers a fitness advantage.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001037023.1
    NM_125286.6
    NM_180886.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within negative gravitropism IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within response to red or far red light IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    glucose-6-phosphate isomerase, putative (DUF641)
    NP_001032100.1
    • GRAVITROPIC IN THE LIGHT (GIL1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF641, plant (InterPro:IPR006943); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF641) (TAIR:AT2G45260.1); Has 292 Blast hits to 290 proteins in 22 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 282; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
    NP_200704.2
    • GRAVITROPIC IN THE LIGHT (GIL1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF641, plant (InterPro:IPR006943); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF641) (TAIR:AT2G45260.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_851217.1
    • GRAVITROPIC IN THE LIGHT (GIL1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF641, plant (InterPro:IPR006943); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF641) (TAIR:AT2G45260.1); Has 300 Blast hits to 298 proteins in 29 species: Archae - 0; Bacteria - 2; Metazoa - 5; Fungi - 2; Plants - 280; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      23805717..23808478
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_180886.2 → NP_851217.1  glucose-6-phosphate isomerase, putative (DUF641) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_851217.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4KGE8, Q8GWZ0, Q9FIL5
      UniProtKB/TrEMBL
      A0A5S9YFC2, A0A654GCC5
      Conserved Domains (1) summary
      pfam04859
      Location:155 → 280
      DUF641; Plant protein of unknown function (DUF641)

    2. NM_125286.6 → NP_200704.2  glucose-6-phosphate isomerase, putative (DUF641) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_200704.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178U8C7
      Conserved Domains (1) summary
      pfam04859
      Location:80 → 205
      DUF641; Plant protein of unknown function (DUF641)

    3. NM_001037023.1 → NP_001032100.1  glucose-6-phosphate isomerase, putative (DUF641) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001032100.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178U8C7
      Conserved Domains (1) summary
      pfam04859
      Location:80 → 205
      DUF641; Plant protein of unknown function (DUF641)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    F4KGE8.1

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