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    RbcX2 Chaperonin-like RbcX protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 832106, updated on 18-Sep-2024

    Summary

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    Official Symbol
    RbcX2
    Official Full Name
    Chaperonin-like RbcX protein
    Primary source
    TAIR:AT5G19855
    Locus tag
    AT5G19855
    See related
    Araport:AT5G19855
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtRbcX2; homologue of cyanobacterial RbcX 2
    Summary
    Encodes a chloroplast stromal localized RbcX protein that acts as a chaperone in the folding of Rubisco.
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    Genomic context

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    See RbcX2 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    4
    Sequence:
    Chromosome: 5; NC_003076.8 (6711943..6713937, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene transmembrane protein, putative (Protein of unknown function, DUF538) Neighboring gene transmembrane epididymal protein (DUF716)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Initial characteristics of RbcX proteins from Arabidopsis thaliana. Kolesiński P, et al. Plant Mol Biol, 2011 Nov. PMID 21922322, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_121991.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein folding chaperone IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables protein folding chaperone IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within chaperone-mediated protein folding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in ribulose bisphosphate carboxylase complex assembly IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast stroma IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Chaperonin-like RbcX protein
    NP_568382.1
    • Chaperonin-like RbcX protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin-like RbcX (InterPro:IPR003435); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      6711943..6713937 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001343626.1 → NP_001330979.1  Chaperonin-like RbcX protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BCG6

    2. NM_121991.4 → NP_568382.1  Chaperonin-like RbcX protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568382.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8L9X2
      UniProtKB/TrEMBL
      A0A178UCQ2, A0A5S9Y5P2
      Conserved Domains (1) summary
      pfam02341
      Location:94 → 160
      RcbX; RbcX protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8L9X2.1

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