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    uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 844217, updated on 18-Sep-2024

    Summary

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    Official Full Name
    uncharacterized protein
    Primary source
    TAIR:AT1G78810
    Locus tag
    AT1G78810
    See related
    Araport:AT1G78810
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F9K20.15; F9K20_15
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    4
    Sequence:
    Chromosome: 1; NC_003070.9 (29628234..29630578, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene pathogenesis-related family protein Neighboring gene centromere protein X Neighboring gene UDP-Glycosyltransferase superfamily protein Neighboring gene LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) Neighboring gene D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001334848.1
    NM_106528.4
    NM_202444.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_178002.2
    • unknown protein; Has 75 Blast hits to 52 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 2; Plants - 66; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
    NP_974173.1
    • unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      29628234..29630578 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_106528.4 → NP_178002.2  uncharacterized protein AT1G78810 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_178002.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W2Q6, A0A7G2E5W4, Q8W461

    2. NM_202444.2 → NP_974173.1  uncharacterized protein AT1G78810 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974173.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W145, A0A384KWR3, A0A7G2E3Z8, F4IBV6

    3. NM_001334848.1 → NP_001320949.1  uncharacterized protein AT1G78810 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W145, A0A384KWR3, A0A7G2E3Z8, F4IBV6
    Nucleotide Protein
    Heading Accession and Version

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