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    K-box region protein (DUF1985) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 840000, updated on 18-Sep-2024

    Summary

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    Official Full Name
    K-box region protein (DUF1985)
    Primary source
    TAIR:AT1G31150
    Locus tag
    AT1G31150
    See related
    Araport:AT1G31150
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F28K20.8; F28K20_8
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (11119827..11122675)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene polyadenylate-binding protein 1-B-binding protein Neighboring gene GORDITA Neighboring gene HISTIDINE TRIAD NUCLEOTIDE-BINDING 2 Neighboring gene F-box associated ubiquitination effector family protein Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001332944.1
    NM_102853.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    K-box region protein (DUF1985)
    NP_174400.1
    • FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1985 (InterPro:IPR015410), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF1985) (TAIR:AT1G36970.1); Has 361 Blast hits to 354 proteins in 51 species: Archae - 0; Bacteria - 2; Metazoa - 8; Fungi - 6; Plants - 334; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      11119827..11122675
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_102853.3 → NP_174400.1  K-box region protein (DUF1985) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_174400.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WJB1, A0A654EED7, Q9SA08
      Conserved Domains (1) summary
      pfam09331
      Location:86 → 215
      DUF1985; Domain of unknown function (DUF1985)

    2. NM_001332944.1 → NP_001321227.1  K-box region protein (DUF1985) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AQ83, A0A654EED7
    Nucleotide Protein
    Heading Accession and Version

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