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    hAT dimerization domain-containing protein / transposase-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816101, updated on 18-Sep-2024

    Summary

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    Official Full Name
    hAT dimerization domain-containing protein / transposase-like protein
    Primary source
    TAIR:AT2G16040
    Locus tag
    AT2G16040
    See related
    Araport:AT2G16040
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F7H1.6; F7H1_6
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    2
    Sequence:
    Chromosome: 2; NC_003071.7 (6976017..6977683)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Neighboring gene ncRNA Neighboring gene Cysteine/Histidine-rich C1 domain family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    hAT dimerization domain-containing protein / transposase-like protein
    NP_179202.1
    • hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT family dimerisation domain (TAIR:AT2G06500.1); Has 701 Blast hits to 553 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 491; Fungi - 0; Plants - 207; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      6976017..6977683
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_127163.2 → NP_179202.1  hAT dimerization domain-containing protein / transposase-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_179202.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WYC5, Q9XII3
      Conserved Domains (2) summary
      pfam05699
      Location:298 → 382
      Dimer_Tnp_hAT; hAT family C-terminal dimerization region
      pfam14291
      Location:22 → 100
      DUF4371; Domain of unknown function (DUF4371)
    Nucleotide Protein
    Heading Accession and Version

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