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    GTE3 global transcription factor group E3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843646, updated on 18-Sep-2024

    Summary

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    Official Symbol
    GTE3
    Official Full Name
    global transcription factor group E3
    Primary source
    TAIR:AT1G73150
    Locus tag
    AT1G73150
    See related
    Araport:AT1G73150
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F3N23.35; F3N23_35; global transcription factor group E3
    Summary
    Bromodomain and extra terminal domain family protein. Binds to acetyl-histone H3. Binding is reduced when GTE3 is SUMOylated by SIZ1.
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    Genomic context

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    See GTE3 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    4
    Sequence:
    Chromosome: 1; NC_003070.9 (27503973..27506406, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene F-box/RNI superfamily protein Neighboring gene mucin Neighboring gene trichome birefringence-like protein (DUF828) Neighboring gene UDP-Glycosyltransferase superfamily protein Neighboring gene CLAVATA3/ESR-RELATED 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The PHD domain of plant PIAS proteins mediates sumoylation of bromodomain GTE proteins. Garcia-Dominguez M, et al. J Biol Chem, 2008 Aug 1. PMID 18502747
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001334569.1
    NM_105973.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables histone binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    global transcription factor group E3
    NP_177458.1
    • global transcription factor group E3 (GTE3); FUNCTIONS IN: histone binding, DNA binding; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT1G17790.1); Has 5728 Blast hits to 4631 proteins in 254 species: Archae - 0; Bacteria - 6; Metazoa - 3450; Fungi - 928; Plants - 599; Viruses - 0; Other Eukaryotes - 745 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      27503973..27506406 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105973.4 → NP_177458.1  global transcription factor group E3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177458.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q0WSA6, Q9S7T1
      UniProtKB/TrEMBL
      A0A178W401, A0A5S9WTX4, A0A654ENK8
      Conserved Domains (2) summary
      cd05506
      Location:120 → 217
      Bromo_plant1; Bromodomain, uncharacterized subfamily specific to plants. Might function as a global transcription factor. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with ...
      pfam17035
      Location:308 → 370
      BET; Bromodomain extra-terminal - transcription regulation

    2. NM_001334569.1 → NP_001320310.1  global transcription factor group E3 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AMI1, A0A654ENK8
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9S7T1.1

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