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    GRF12 general regulatory factor 12 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839189, updated on 18-Sep-2024

    Summary

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    Official Symbol
    GRF12
    Official Full Name
    general regulatory factor 12
    Primary source
    TAIR:AT1G26480
    Locus tag
    AT1G26480
    See related
    Araport:AT1G26480
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    general regulatory factor 12; GF14 IOTA; T1K7.15; T1K7_15
    Summary
    14-3-3 protein GF14iota (grf12)
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    Genomic context

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    See GRF12 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    7
    Sequence:
    Chromosome: 1; NC_003070.9 (9156279..9158093, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Carbohydrate-binding X8 domain superfamily protein Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene chromatin modification-like protein Neighboring gene tRNA-Ala Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Mutational analysis of the AtNUDT7 Nudix hydrolase from Arabidopsis thaliana reveals residues required for protein quaternary structure formation and activity. Olejnik K, et al. Acta Biochim Pol, 2009. PMID 19448856
    2. Interaction of a plant 14-3-3 protein with the signal peptide of a thylakoid-targeted chloroplast precursor protein and the presence of 14-3-3 isoforms in the chloroplast stroma. Sehnke PC, et al. Plant Physiol, 2000 Jan. PMID 10631267, Free PMC Article
    3. Uncovering Arabidopsis membrane protein interactome enriched in transporters using mating-based split ubiquitin assays and classification models. Chen J, et al. Front Plant Sci, 2012. PMID 22737156, Free PMC Article
    4. 14-3-3 proteins fine-tune plant nutrient metabolism. Shin R, et al. FEBS Lett, 2011 Jan 3. PMID 21094157
    5. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_102411.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein phosphorylated amino acid binding TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    general regulatory factor 12
    NP_564249.1
    • general regulatory factor 12 (GRF12); FUNCTIONS IN: protein phosphorylated amino acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: 14-3-3 protein (InterPro:IPR000308); BEST Arabidopsis thaliana protein match is: general regulatory factor 9 (TAIR:AT2G42590.3); Has 2719 Blast hits to 2708 proteins in 388 species: Archae - 0; Bacteria - 8; Metazoa - 1259; Fungi - 334; Plants - 765; Viruses - 0; Other Eukaryotes - 353 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      9156279..9158093 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_102411.3 → NP_564249.1  general regulatory factor 12 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564249.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q541X6, Q8LEN1, Q9C5W6, Q9FZD3
      UniProtKB/TrEMBL
      A0A178WJF9, A0A5S9W0C6
      Conserved Domains (1) summary
      pfam00244
      Location:16 → 237
      14-3-3; 14-3-3 protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9C5W6.1

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