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    ACA5 alpha carbonic anhydrase 5 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837324, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ACA5
    Official Full Name
    alpha carbonic anhydrase 5
    Primary source
    TAIR:AT1G08065
    Locus tag
    AT1G08065
    See related
    Araport:AT1G08065
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    alpha carbonic anhydrase 5; ALPHA CARBONIC ANHYDRASE 5; ATACA5; T6D22.30; T6D22_30
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    Genomic context

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    See ACA5 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    7
    Sequence:
    Chromosome: 1; NC_003070.9 (2511647..2513454, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Zinc finger (C3HC4-type RING finger) family protein Neighboring gene ATP-dependent helicase family protein Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene alpha carbonic anhydrase 7

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Alpha Carbonic Anhydrase 5 Mediates Stimulation of ATP Synthesis by Bicarbonate in Isolated Arabidopsis Thylakoids. Fedorchuk TP, et al. Front Plant Sci, 2021. PMID 34512677, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_100681.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables carbonate dehydratase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in stromal side of plastid thylakoid membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    alpha carbonic anhydrase 5
    NP_172285.2
    • alpha carbonic anhydrase 5 (ACA5); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: one-carbon metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, alpha-class, catalytic domain (InterPro:IPR001148), Carbonic anhydrase, CAH1-like (InterPro:IPR018340); BEST Arabidopsis thaliana protein match is: alpha carbonic anhydrase 7 (TAIR:AT1G08080.1); Has 3351 Blast hits to 3338 proteins in 543 species: Archae - 0; Bacteria - 710; Metazoa - 2051; Fungi - 82; Plants - 328; Viruses - 7; Other Eukaryotes - 173 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      2511647..2513454 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_100681.2 → NP_172285.2  alpha carbonic anhydrase 5 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_172285.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4HUC4
      UniProtKB/TrEMBL
      A0A654E915
      Conserved Domains (2) summary
      PLN02179
      Location:9 → 231
      PLN02179; carbonic anhydrase
      cd03124
      Location:44 → 265
      alpha_CA_prokaryotic_like; Carbonic anhydrase alpha, prokaryotic-like subfamily. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    F4HUC4.1

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