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    scpl6 serine carboxypeptidase-like 6 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843661, updated on 18-Sep-2024

    Summary

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    Official Symbol
    scpl6
    Official Full Name
    serine carboxypeptidase-like 6
    Primary source
    TAIR:AT1G73270
    Locus tag
    AT1G73270
    See related
    Araport:AT1G73270
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    serine carboxypeptidase-like 6; T18K17.6; T18K17_6
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    Genomic context

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    See scpl6 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    15
    Sequence:
    Chromosome: 1; NC_003070.9 (27549021..27552517, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase 1 Neighboring gene kunitz trypsin inhibitor 1 Neighboring gene serine carboxypeptidase-like 3 Neighboring gene serine carboxypeptidase-like 5

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables serine-type carboxypeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    serine carboxypeptidase-like 6
    NP_177470.4
    • serine carboxypeptidase-like 6 (scpl6); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 3 (TAIR:AT1G73280.1); Has 3982 Blast hits to 3889 proteins in 444 species: Archae - 0; Bacteria - 469; Metazoa - 638; Fungi - 830; Plants - 1631; Viruses - 0; Other Eukaryotes - 414 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      27549021..27552517 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105986.4 → NP_177470.4  serine carboxypeptidase-like 6 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177470.4

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9CAU0
      UniProtKB/TrEMBL
      A0A178WRP4
      Conserved Domains (1) summary
      cl08270
      Location:25 → 441
      Peptidase_S10; Serine carboxypeptidase

    2. NM_001334576.1 → NP_001320213.1  serine carboxypeptidase-like 6 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WRP4
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9CAU0.2

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