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    RLP13 receptor like protein 13 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843757, updated on 18-Sep-2024

    Summary

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    Official Symbol
    RLP13
    Official Full Name
    receptor like protein 13
    Primary source
    TAIR:AT1G74170
    Locus tag
    AT1G74170
    See related
    Araport:AT1G74170
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtRLP13; F9E11.7; F9E11_7; receptor like protein 13
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    Genomic context

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    See RLP13 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    8
    Sequence:
    Chromosome: 1; NC_003070.9 (27891494..27896436, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Galactose oxidase/kelch repeat superfamily protein Neighboring gene LONGIFOLIA protein Neighboring gene receptor like protein 14 Neighboring gene ncRNA Neighboring gene receptor like protein 15

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The leucine-rich repeat as a protein recognition motif. Kobe B, et al. Curr Opin Struct Biol, 2001 Dec. PMID 11751054
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001334634.1
    NM_106077.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within signal transduction IC
    Inferred by Curator
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    receptor like protein 13
    NP_177557.2
    • receptor like protein 13 (RLP13); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 15 (TAIR:AT1G74190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      27891494..27896436 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_106077.4 → NP_177557.2  receptor like protein 13 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177557.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WU77, F4HTV3
      Conserved Domains (3) summary
      cd00116
      Location:71 → 345
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:98 → 122
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:258 → 318
      LRR_8; Leucine rich repeat

    2. NM_001334634.1 → NP_001322432.1  receptor like protein 13 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9C6A6
      UniProtKB/TrEMBL
      A0A5S9WU77
      Conserved Domains (3) summary
      sd00033
      Location:142 → 165
      LRR_RI; leucine-rich repeat [structural motif]
      pfam08263
      Location:31 → 74
      LRRNT_2; Leucine rich repeat N-terminal domain
      cl26793
      Location:238 → 957
      PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9C6A6.1

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