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    Sterile alpha motif (SAM) domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819967, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Sterile alpha motif (SAM) domain-containing protein
    Primary source
    TAIR:AT3G07760
    Locus tag
    AT3G07760
    See related
    Araport:AT3G07760
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MLP3.21
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    5
    Sequence:
    Chromosome: 3; NC_003074.8 (2476306..2478715)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene ADA2 2A Neighboring gene 3'-5'-exoribonuclease family protein Neighboring gene HEAT SHOCK PROTEIN 89.1 Neighboring gene potyvirus VPg interacting protein (DUF1423)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001337733.1
    NM_001337734.1
    NM_001337737.1
    NM_001337738.1
    NM_001337739.1
    NM_001337740.1
    NM_001337741.1
    NM_111655.5
    NM_180207.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Sterile alpha motif (SAM) domain-containing protein
    NP_566319.1
    • Sterile alpha motif (SAM) domain-containing protein; CONTAINS InterPro DOMAIN/s: Sterile alpha motif (InterPro:IPR001660), Sterile alpha motif homology (InterPro:IPR010993), Sterile alpha motif, type 2 (InterPro:IPR011510); Has 60 Blast hits to 60 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 6; Plants - 44; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
    NP_850538.1
    • Sterile alpha motif (SAM) domain-containing protein; CONTAINS InterPro DOMAIN/s: Sterile alpha motif (InterPro:IPR001660), Sterile alpha motif homology (InterPro:IPR010993), Sterile alpha motif, type 2 (InterPro:IPR011510); Has 60 Blast hits to 60 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 6; Plants - 44; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      2476306..2478715
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001337735.1 → NP_001327338.1  Sterile alpha motif (SAM) domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LS02

    2. NM_001337736.1 → NP_001327335.1  Sterile alpha motif (SAM) domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LS00

    3. NM_111655.5 → NP_566319.1  Sterile alpha motif (SAM) domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566319.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VI22, A0A384L6D2, A0A654FAE3, Q93VV3
      Conserved Domains (1) summary
      cl15755
      Location:15 → 49
      SAM_superfamily; SAM (Sterile alpha motif )

    4. NM_180207.3 → NP_850538.1  Sterile alpha motif (SAM) domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850538.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VI22, A0A384L6D2, A0A654FAE3, Q93VV3
      Conserved Domains (1) summary
      cl15755
      Location:15 → 49
      SAM_superfamily; SAM (Sterile alpha motif )

    5. NM_001337737.1 → NP_001327341.1  Sterile alpha motif (SAM) domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VI22, A0A384L6D2, A0A654FAE3, Q93VV3
      Conserved Domains (1) summary
      cl15755
      Location:15 → 49
      SAM_superfamily; SAM (Sterile alpha motif )

    6. NM_001337738.1 → NP_001327339.1  Sterile alpha motif (SAM) domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LS02

    7. NM_001337740.1 → NP_001327336.1  Sterile alpha motif (SAM) domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LS00

    8. NM_001337739.1 → NP_001327340.1  Sterile alpha motif (SAM) domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LS02

    9. NM_001337741.1 → NP_001327337.1  Sterile alpha motif (SAM) domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LS01

    10. NM_001337733.1 → NP_001327342.1  Sterile alpha motif (SAM) domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LS06, A0A654FAE3

    11. NM_001337734.1 → NP_001327343.1  Sterile alpha motif (SAM) domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LS01
    Nucleotide Protein
    Heading Accession and Version

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