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    Nucleic acid-binding proteins superfamily [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820959, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Nucleic acid-binding proteins superfamily
    Primary source
    TAIR:AT3G17030
    Locus tag
    AT3G17030
    See related
    Araport:AT3G17030
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    13
    Sequence:
    Chromosome: 3; NC_003074.8 (5804291..5808578, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene AP2/B3-like transcriptional factor family protein Neighboring gene Adenine nucleotide alpha hydrolases-like superfamily protein Neighboring gene high chlorophyll fluorescent 107 Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_112579.6

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Nucleic acid-binding proteins superfamily
    NP_188328.5
    • Nucleic acid-binding proteins superfamily; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027); Has 37 Blast hits to 37 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      5804291..5808578 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_112579.6 → NP_188328.5  Nucleic acid-binding proteins superfamily [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_188328.5

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654F9U6, F4J3Z2, Q9LSP4
      Conserved Domains (3) summary
      pfam17244
      Location:404 → 632
      CDC24_OB3; Cell division control protein 24, OB domain 3
      pfam17245
      Location:160 → 290
      CDC24_OB2; Cell division control protein 24, OB domain 2
      pfam17246
      Location:22 → 155
      CDC24_OB1; Cell division control protein 24, OB domain 1
    Nucleotide Protein
    Heading Accession and Version

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