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    RLK902 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821405, updated on 18-Sep-2024

    Summary

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    Official Symbol
    RLK902
    Official Full Name
    Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
    Primary source
    TAIR:AT3G18740
    Locus tag
    AT3G18740
    See related
    Araport:AT3G18740
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    receptor-like kinase 902
    Summary
    The gene encodes a putative leucine-rich repeat (LRR)Receptor-like kinase (RLK).
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    Genomic context

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    See RLK902 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    2
    Sequence:
    Chromosome: 3; NC_003074.8 (6453303..6454018)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene F-box family protein Neighboring gene tetratricopeptide repeat (TPR)-containing protein Neighboring gene with no lysine (K) kinase 6 Neighboring gene Translation elongation factor EF1B/ribosomal protein S6 family protein Neighboring gene Autophagy-related protein 13

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Trans-repression of gene activity upstream of T-DNA tagged RLK902 links Arabidopsis root growth inhibition and downy mildew resistance. ten Hove CA, et al. PLoS One, 2011 Apr 21. PMID 21532992, Free PMC Article
    2. Arabidopsis thaliana AHL family modulates hypocotyl growth redundantly by interacting with each other via the PPC/DUF296 domain. Zhao J, et al. Proc Natl Acad Sci U S A, 2013 Nov 26. PMID 24218605, Free PMC Article
    3. Proteomic characterization of evolutionarily conserved and variable proteins of Arabidopsis cytosolic ribosomes. Chang IF, et al. Plant Physiol, 2005 Mar. PMID 15734919, Free PMC Article
    4. Identification and dynamics of Arabidopsis adaptor protein-2 complex and its involvement in floral organ development. Yamaoka S, et al. Plant Cell, 2013 Aug. PMID 23975897, Free PMC Article
    5. Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase. Van Leene J, et al. Nat Plants, 2019 Mar. PMID 30833711

    See all (14) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_112760.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables mRNA binding HDA PubMed 
    enables mRNA binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within response to fungus IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytosol HDA PubMed 
    NOT located_in cytosol RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 
    part_of cytosolic large ribosomal subunit HDA PubMed 
    located_in cytosolic ribosome HDA PubMed 
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasmodesma HDA PubMed 

    General protein information

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    Preferred Names
    Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
    NP_188504.1
    • Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L30e (InterPro:IPR000231); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT1G77940.1); Has 1082 Blast hits to 1081 proteins in 384 species: Archae - 212; Bacteria - 3; Metazoa - 399; Fungi - 147; Plants - 146; Viruses - 0; Other Eukaryotes - 175 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      6453303..6454018
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_112760.4 → NP_188504.1  Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_188504.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LSA3
      UniProtKB/TrEMBL
      A0A178VBY8, A0A178WHX8, A0A5S9WJC5, A0A5S9XDZ8, A0A654EGU7
      Conserved Domains (1) summary
      PTZ00106
      Location:2 → 108
      PTZ00106; 60S ribosomal protein L30; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LSA3.1

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