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    Myb/SANT-like DNA-binding domain protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827547, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Myb/SANT-like DNA-binding domain protein
    Primary source
    TAIR:AT4G02210
    Locus tag
    AT4G02210
    See related
    Araport:AT4G02210
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T2H3.2
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    5
    Sequence:
    Chromosome: 4; NC_003075.7 (973924..976154, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene syntaxin of plants 42 Neighboring gene Drought-responsive family protein Neighboring gene ncRNA Neighboring gene zinc finger (MYND type) family protein / programmed cell death 2 C-terminal domain-containing protein Neighboring gene Ribosomal protein L19e family protein Neighboring gene AGAMOUS-like 51

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001340368.1
    NM_116454.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Myb/SANT-like DNA-binding domain protein
    NP_001319843.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2).
    NP_567224.1
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2); Has 791 Blast hits to 465 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 748; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      973924..976154 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_116454.4 → NP_567224.1  Myb/SANT-like DNA-binding domain protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567224.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UWI1, O81424, Q949Q3
      Conserved Domains (1) summary
      pfam12776
      Location:14 → 108
      Myb_DNA-bind_3; Myb/SANT-like DNA-binding domain

    2. NM_001340368.1 → NP_001319843.1  Myb/SANT-like DNA-binding domain protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UWI1, O81424, Q949Q3
      Conserved Domains (1) summary
      pfam12776
      Location:14 → 108
      Myb_DNA-bind_3; Myb/SANT-like DNA-binding domain
    Nucleotide Protein
    Heading Accession and Version

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