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    AAA-type ATPase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827616, updated on 18-Sep-2024

    Summary

    Official Full Name
    AAA-type ATPase family protein
    Primary source
    TAIR:AT4G18820
    Locus tag
    AT4G18820
    See related
    Araport:AT4G18820
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F28A21.230; F28A21_230
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    Genomic context

    Location:
    chromosome: 4
    Exon count:
    6
    Sequence:
    Chromosome: 4; NC_003075.7 (10329613..10334383)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene NAD(P)-binding Rossmann-fold superfamily protein Neighboring gene tRNA-Gly Neighboring gene Defensin-like (DEFL) family protein Neighboring gene ncRNA Neighboring gene Pentatricopeptide repeat (PPR-like) superfamily protein Neighboring gene ovate family protein 5

    Interactions

    General gene information

    NM_117998.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ATP hydrolysis activity  
    enables DNA binding  
    enables DNA-directed DNA polymerase activity  
    Process Evidence Code Pubs
    involved_in DNA replication  
    Component Evidence Code Pubs
    part_of DNA polymerase III complex  
    located_in nucleus  

    General protein information

    Preferred Names
    AAA-type ATPase family protein
    NP_193617.3
    • AAA-type ATPase family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, DNA-directed DNA polymerase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: DNA replication; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921), DNA polymerase III, subunit gamma/ tau (InterPro:IPR012763); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT5G45720.1); Has 12659 Blast hits to 12635 proteins in 2803 species: Archae - 377; Bacteria - 7447; Metazoa - 406; Fungi - 391; Plants - 312; Viruses - 22; Other Eukaryotes - 3704 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      10329613..10334383
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_117998.4 → NP_193617.3  AAA-type ATPase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_193617.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4JRP0, Q9SN33
      UniProtKB/TrEMBL
      A0A178UXG5
      Conserved Domains (3) summary
      TIGR02397
      Location:430 → 780
      dnaX_nterm; DNA polymerase III, subunit gamma and tau
      pfam12169
      Location:658 → 715
      DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III
      cl21455
      Location:470 → 602
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
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