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    terpenoid synthase superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827770, updated on 18-Sep-2024

    Summary

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    Official Full Name
    terpenoid synthase superfamily protein
    Primary source
    TAIR:AT4G20230
    Locus tag
    AT4G20230
    See related
    Araport:AT4G20230
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F1C12.150; F1C12_150
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    7
    Sequence:
    Chromosome: 4; NC_003075.7 (10924100..10926833, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Terpenoid cyclases/Protein prenyltransferases superfamily protein Neighboring gene Reverse transcriptase (RNA-dependent DNA polymerase) Neighboring gene cytochrome P450, family 71, subfamily A, polypeptide 28 Neighboring gene cytochrome P450, family 71, subfamily A, polypeptide 27

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of a Dolabellane Type Diterpene Synthase and other Root-Expressed Diterpene Synthases in Arabidopsis. Wang Q, et al. Front Plant Sci, 2016. PMID 27933080, Free PMC Article
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001341404.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables magnesium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables terpene synthase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables terpene synthase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in diterpenoid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in terpenoid biosynthetic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    terpenoid synthase superfamily protein
    NP_001320004.1
    • Terpenoid cyclases/Protein prenyltransferases superfamily protein; FUNCTIONS IN: lyase activity, magnesium ion binding; INVOLVED IN: metabolic process; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT4G20200.1); Has 1640 Blast hits to 1613 proteins in 178 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 1633; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      10924100..10926833 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118142.4 → NP_193756.3  terpenoid synthase superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B581, A0A5S9XU67, A0A654FR35

    2. NM_001341404.1 → NP_001320004.1  terpenoid synthase superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4JUT0, O65437, Q56XR1, Q84UU8, Q8L7G4
      UniProtKB/TrEMBL
      A0A5S9XU67, A0A654FR35
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8L7G4.2

    Gene LinkOut

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