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    MEB1 vacuolar iron transporter (VIT) family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828899, updated on 18-Sep-2024

    Summary

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    Official Symbol
    MEB1
    Official Full Name
    vacuolar iron transporter (VIT) family protein
    Primary source
    TAIR:AT4G27860
    Locus tag
    AT4G27860
    See related
    Araport:AT4G27860
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MEMBRANE OF ER BODY 1; T27E11.100; T27E11_100
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    Genomic context

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    See MEB1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    8
    Sequence:
    Chromosome: 4; NC_003075.7 (13873708..13876528)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Glycine-rich protein family Neighboring gene ncRNA Neighboring gene Vacuolar iron transporter (VIT) family protein Neighboring gene tRNA-Gln

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of two novel endoplasmic reticulum body-specific integral membrane proteins. Yamada K, et al. Plant Physiol, 2013 Jan. PMID 23166355, Free PMC Article
    2. Novel Aquaporin Regulatory Mechanisms Revealed by Interactomics. Bellati J, et al. Mol Cell Proteomics, 2016 Nov. PMID 27609422, Free PMC Article
    3. Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Nikolovski N, et al. Plant Physiol, 2012 Oct. PMID 22923678, Free PMC Article
    4. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. MEB1 and MEB2 are endoplasmic reticulum body integral membrane proteins and are probably metal transporters.
      Title: Identification of two novel endoplasmic reticulum body-specific integral membrane proteins.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001203926.1
    NM_001341888.1
    NM_001341889.1
    NM_118924.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables iron ion transmembrane transporter activity IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    enables manganese ion transmembrane transporter activity IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in ER body IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in endoplasmic reticulum HDA PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    vacuolar iron transporter (VIT) family protein
    NP_001190855.1
    • vacuolar iron transporter (VIT) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: embryo, hypocotyl, root, pedicel, leaf; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF125, transmembrane (InterPro:IPR008217), Cytokine, IL-1-like (InterPro:IPR008996); BEST Arabidopsis thaliana protein match is: Vacuolar iron transporter (VIT) family protein (TAIR:AT4G27870.1).
    NP_567788.1
    • vacuolar iron transporter (VIT) family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF125, transmembrane (InterPro:IPR008217), Cytokine, IL-1-like (InterPro:IPR008996); BEST Arabidopsis thaliana protein match is: Vacuolar iron transporter (VIT) family protein (TAIR:AT4G27870.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      13873708..13876528
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001203926.1 → NP_001190855.1  vacuolar iron transporter (VIT) family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190855.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XWH5, A0A654FTI1, A0A7G2F667
      Conserved Domains (2) summary
      PHA03151
      Location:2 → 140
      PHA03151; hypothetical protein; Provisional
      cl00278
      Location:397 → 577
      CCC1_like; CCC1-related family of proteins

    2. NM_118924.2 → NP_567788.1  vacuolar iron transporter (VIT) family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567788.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      C0Z3G6, F4JJT0, Q8W4P8, Q9STP0
      UniProtKB/TrEMBL
      A0A7G2F805
      Conserved Domains (2) summary
      PHA03151
      Location:2 → 140
      PHA03151; hypothetical protein; Provisional
      cl00278
      Location:412 → 592
      CCC1_like; CCC1-related family of proteins

    3. NM_001341888.1 → NP_001329317.1  vacuolar iron transporter (VIT) family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B7E1, A0A654FTI1, A0A7G2F667

    4. NM_001341889.1 → NP_001329316.1  vacuolar iron transporter (VIT) family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B7C6, A0A654FTI1, A0A7G2F667
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8W4P8.1

    Gene LinkOut

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