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    low-temperature-induced protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 823828, updated on 18-Sep-2024

    Summary

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    Official Full Name
    low-temperature-induced protein
    Primary source
    TAIR:AT3G46750
    Locus tag
    AT3G46750
    See related
    Araport:AT3G46750
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    5
    Sequence:
    Chromosome: 3; NC_003074.8 (17219741..17221772)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene NB-ARC domain-containing disease resistance protein Neighboring gene uncharacterized protein Neighboring gene translocon at the outer envelope membrane of chloroplasts 75-III Neighboring gene Protein kinase superfamily protein Neighboring gene AP2/B3-like transcriptional factor family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_114542.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in response to abscisic acid IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    low-temperature-induced protein
    NP_190259.2
    • unknown protein; Has 2631 Blast hits to 1984 proteins in 271 species: Archae - 6; Bacteria - 163; Metazoa - 1232; Fungi - 253; Plants - 141; Viruses - 8; Other Eukaryotes - 828 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      17219741..17221772
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_114542.4 → NP_190259.2  low-temperature-induced protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_190259.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VB31, A0A5S9XIE8, A0A654FEC7, Q5XVB0
      Conserved Domains (1) summary
      PLN03020
      Location:174 → 341
      PLN03020; low-temperature-induced protein; Provisional
    Nucleotide Protein
    Heading Accession and Version

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