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    D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824334, updated on 18-Sep-2024

    Summary

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    Official Full Name
    D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein
    Primary source
    TAIR:AT3G51710
    Locus tag
    AT3G51710
    See related
    Araport:AT3G51710
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    2
    Sequence:
    Chromosome: 3; NC_003074.8 (19182289..19184152)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene PIF1 helicase Neighboring gene ncRNA Neighboring gene WEB family protein (DUF827) Neighboring gene saposin B domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_115030.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein
    NP_190739.1
    • D-mannose binding lectin protein with Apple-like carbohydrate-binding domain; FUNCTIONS IN: sugar binding; INVOLVED IN: recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Apple-like (InterPro:IPR003609), S-locus glycoprotein (InterPro:IPR000858); BEST Arabidopsis thaliana protein match is: D-mannose binding lectin protein with Apple-like carbohydrate-binding domain (TAIR:AT5G03700.1); Has 1533 Blast hits to 1511 proteins in 55 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 0; Plants - 1529; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      19182289..19184152
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_115030.2 → NP_190739.1  D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_190739.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VNJ9, A0A654FEY1, A0A7G2EQC7, Q9SCT7
      Conserved Domains (2) summary
      cl00112
      Location:344 → 408
      PAN_APPLE; PAN/APPLE-like domain; present in N-terminal (N) domains of plasminogen/ hepatocyte growth factor proteins, plasma prekallikrein/coagulation factor XI and microneme antigen proteins, plant receptor-like protein kinases, and various nematode and leech ...
      cl24013
      Location:92 → 165
      B_lectin; Bulb-type mannose-specific lectin. The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically ...
    Nucleotide Protein
    Heading Accession and Version

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