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    emb1967 Forkhead-associated (FHA) domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824602, updated on 18-Sep-2024

    Summary

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    Official Symbol
    emb1967
    Official Full Name
    Forkhead-associated (FHA) domain-containing protein
    Primary source
    TAIR:AT3G54350
    Locus tag
    AT3G54350
    See related
    Araport:AT3G54350
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    embryo defective 1967
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    Genomic context

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    See emb1967 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    10
    Sequence:
    Chromosome: 3; NC_003074.8 (20122017..20126981, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Integrase-type DNA-binding superfamily protein Neighboring gene K-box region and MADS-box transcription factor family protein Neighboring gene zinc ion binding protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Extensive signal integration by the phytohormone protein network. Altmann M, et al. Nature, 2020 Jul. PMID 32612234
    2. CrY2H-seq: a massively multiplexed assay for deep-coverage interactome mapping. Wanamaker SA, et al. Nat Methods, 2017 Aug. PMID 28650476, Free PMC Article
    3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    NM_001084815.2
    NM_001339661.1
    NM_001339662.1
    NM_115295.2
    NM_180371.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables G-quadruplex RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within embryo development ending in seed dormancy NAS
    Non-traceable Author Statement
    more info
    		  
    Component Evidence Code Pubs
    part_of Ino80 complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of MLL1 complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Forkhead-associated (FHA) domain-containing protein
    NP_001078284.1
    • embryo defective 1967 (emb1967); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: Forkhead-associated (FHA) domain-containing protein (TAIR:AT1G75530.1); Has 387 Blast hits to 260 proteins in 92 species: Archae - 0; Bacteria - 0; Metazoa - 229; Fungi - 23; Plants - 94; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink).
    NP_566998.1
    • embryo defective 1967 (emb1967); CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: Forkhead-associated (FHA) domain-containing protein (TAIR:AT1G75530.1); Has 387 Blast hits to 260 proteins in 92 species: Archae - 0; Bacteria - 0; Metazoa - 229; Fungi - 23; Plants - 94; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink).
    NP_850702.1
    • embryo defective 1967 (emb1967); CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: Forkhead-associated (FHA) domain-containing protein (TAIR:AT1G75530.1); Has 387 Blast hits to 260 proteins in 92 species: Archae - 0; Bacteria - 0; Metazoa - 229; Fungi - 23; Plants - 94; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      20122017..20126981 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001084815.2 → NP_001078284.1  Forkhead-associated (FHA) domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001078284.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VBF4, A0A384KA39, F4JCV6, Q9M2V2
      Conserved Domains (2) summary
      cd00060
      Location:601 → 685
      FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
      pfam13325
      Location:10 → 68
      MCRS_N; N-terminal region of micro-spherule protein

    2. NM_115295.2 → NP_566998.1  Forkhead-associated (FHA) domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566998.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VBF4, A0A384KA39, F4JCV6, Q9M2V2
      Conserved Domains (2) summary
      cd00060
      Location:601 → 685
      FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
      pfam13325
      Location:10 → 68
      MCRS_N; N-terminal region of micro-spherule protein

    3. NM_180371.2 → NP_850702.1  Forkhead-associated (FHA) domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850702.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VBF4, A0A384KA39, F4JCV6, Q9M2V2
      Conserved Domains (2) summary
      cd00060
      Location:601 → 685
      FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
      pfam13325
      Location:10 → 68
      MCRS_N; N-terminal region of micro-spherule protein

    4. NM_001339661.1 → NP_001325804.1  Forkhead-associated (FHA) domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VBF4, A0A384KA39, F4JCV6, Q9M2V2
      Conserved Domains (2) summary
      cd00060
      Location:601 → 685
      FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
      pfam13325
      Location:10 → 68
      MCRS_N; N-terminal region of micro-spherule protein

    5. NM_001339662.1 → NP_001325803.1  Forkhead-associated (FHA) domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VBF4, A0A384KA39, F4JCV6, Q9M2V2
      Conserved Domains (2) summary
      cd00060
      Location:601 → 685
      FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
      pfam13325
      Location:10 → 68
      MCRS_N; N-terminal region of micro-spherule protein
    Nucleotide Protein
    Heading Accession and Version

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