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    DnaJ heat shock amino-terminal domain protein (DUF1977) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824901, updated on 18-Sep-2024

    Summary

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    Official Full Name
    DnaJ heat shock amino-terminal domain protein (DUF1977)
    Primary source
    TAIR:AT3G57340
    Locus tag
    AT3G57340
    See related
    Araport:AT3G57340
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    2
    Sequence:
    Chromosome: 3; NC_003074.8 (21218751..21220485)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein Neighboring gene threonine-tRNA ligase 2 Neighboring gene autoinhibited Ca2+-ATPase 11 Neighboring gene ncRNA Neighboring gene Nucleoporin interacting component (Nup93/Nic96-like) family protein Neighboring gene tRNA-splicing endonuclease subunit Neighboring gene Cyclin family protein Neighboring gene Glycosyltransferase family 61 protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_115594.3
    NM_180383.2

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    DnaJ heat shock amino-terminal domain protein (DUF1977)
    NP_191293.1
    • FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Protein of unknown function DUF1977, DnaJ-like (InterPro:IPR015399), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT5G05750.1); Has 24356 Blast hits to 24336 proteins in 3323 species: Archae - 190; Bacteria - 9449; Metazoa - 4326; Fungi - 2357; Plants - 2505; Viruses - 22; Other Eukaryotes - 5507 (source: NCBI BLink).
    NP_850714.1
    • FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Protein of unknown function DUF1977, DnaJ-like (InterPro:IPR015399), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT5G05750.1); Has 24356 Blast hits to 24336 proteins in 3323 species: Archae - 190; Bacteria - 9449; Metazoa - 4326; Fungi - 2357; Plants - 2505; Viruses - 22; Other Eukaryotes - 5507 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      21218751..21220485
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_115594.3 → NP_191293.1  DnaJ heat shock amino-terminal domain protein (DUF1977) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_191293.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V8G5, A0A384L618, Q8VZB6, Q9M2L3
      Conserved Domains (2) summary
      COG0484
      Location:109 → 210
      DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
      pfam09320
      Location:276 → 361
      DUF1977; Domain of unknown function (DUF1977)

    2. NM_180383.2 → NP_850714.1  DnaJ heat shock amino-terminal domain protein (DUF1977) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850714.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V8G5, A0A384L618, Q8VZB6, Q9M2L3
      Conserved Domains (2) summary
      COG0484
      Location:109 → 210
      DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
      pfam09320
      Location:276 → 361
      DUF1977; Domain of unknown function (DUF1977)
    Nucleotide Protein
    Heading Accession and Version

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