U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    RUS5 root UVB sensitive protein (Protein of unknown function, DUF647) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831819, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    RUS5
    Official Full Name
    root UVB sensitive protein (Protein of unknown function, DUF647)
    Primary source
    TAIR:AT5G01510
    Locus tag
    AT5G01510
    See related
    Araport:AT5G01510
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F7A7.30; F7A7_30; ROOT UV-B SENSITIVE 5
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See RUS5 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    15
    Sequence:
    Chromosome: 5; NC_003076.8 (201603..205679)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene cation exchanger 4 Neighboring gene thylakoid ATP/ADP carrier Neighboring gene RING/U-box superfamily protein Neighboring gene light harvesting complex photosystem II

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. ROOT UV-B SENSITIVE2 acts with ROOT UV-B SENSITIVE1 in a root ultraviolet B-sensing pathway. Leasure CD, et al. Plant Physiol, 2009 Aug. PMID 19515790, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help
    NM_120229.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    root UVB sensitive protein (Protein of unknown function, DUF647)
    NP_195771.2
    • ROOT UV-B SENSITIVE 5 (RUS5); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF647 (InterPro:IPR006968); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF647 (TAIR:AT3G45890.1); Has 426 Blast hits to 424 proteins in 125 species: Archae - 0; Bacteria - 2; Metazoa - 111; Fungi - 69; Plants - 183; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      201603..205679
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_120229.4 → NP_195771.2  root UVB sensitive protein (Protein of unknown function, DUF647) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195771.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      B6IDH3, Q9M023
      UniProtKB/TrEMBL
      A0A178UPH1, A0A5S9Y0G5
      Conserved Domains (1) summary
      pfam04884
      Location:110 → 346
      DUF647; Vitamin B6 photo-protection and homoeostasis
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    B6IDH3.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools