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    NFXL2 NF-X1-type zinc finger protein NFXL2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830450, updated on 18-Sep-2024

    Summary

    Official Symbol
    NFXL2
    Official Full Name
    NF-X1-type zinc finger protein NFXL2
    Primary source
    TAIR:AT5G05660
    Locus tag
    AT5G05660
    See related
    Araport:AT5G05660
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    Arabidopsis NF-X like 2; ATNFXL2; EARLY BIRD; EBI; MJJ3.6; MJJ3_6; NFX1-like 2
    Summary
    Encodes a homolog of the mammalian zinc finger transcription factor NF-X1.
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    Genomic context

    See NFXL2 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    13
    Sequence:
    Chromosome: 5; NC_003076.8 (1690571..1695557, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family protein Neighboring gene signal recognition particle binding protein Neighboring gene uncharacterized protein Neighboring gene nuclear pore complex protein-like protein Neighboring gene Cytochrome P450 superfamily protein

    Interactions

    General gene information

    NM_120648.6

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in nucleus PubMed 
    located_in nucleus  

    General protein information

    Preferred Names
    NF-X1-type zinc finger protein NFXL2
    NP_196185.4
    • ATNFXL2; FUNCTIONS IN: zinc ion binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, NF-X1-type (InterPro:IPR000967), Zinc finger, PHD-type, conserved site (InterPro:IPR019786); BEST Arabidopsis thaliana protein match is: NF-X-like 1 (TAIR:AT1G10170.1); Has 10412 Blast hits to 5299 proteins in 265 species: Archae - 4; Bacteria - 94; Metazoa - 8397; Fungi - 425; Plants - 250; Viruses - 11; Other Eukaryotes - 1231 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      1690571..1695557 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_120648.6 → NP_196185.4  NF-X1-type zinc finger protein NFXL2 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4K0S4, Q9FFK8
      UniProtKB/TrEMBL
      A0A178UB61
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