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    SCPL34 serine carboxypeptidase-like 34 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 832385, updated on 18-Sep-2024

    Summary

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    Official Symbol
    SCPL34
    Official Full Name
    serine carboxypeptidase-like 34
    Primary source
    TAIR:AT5G23210
    Locus tag
    AT5G23210
    See related
    Araport:AT5G23210
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MKD15.7; MKD15_7; serine carboxypeptidase-like 34
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    Genomic context

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    See SCPL34 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    11
    Sequence:
    Chromosome: 5; NC_003076.8 (7810645..7815089)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene cytochrome P450, family 86, subfamily B, polypeptide 1 Neighboring gene C5orf35 Neighboring gene Defensin-like (DEFL) family protein Neighboring gene nicotinamidase 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001085146.2
    NM_001085147.2
    NM_001343793.1
    NM_122227.2
    NM_180731.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables serine-type carboxypeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plant-type vacuole HDA PubMed 

    General protein information

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    Preferred Names
    serine carboxypeptidase-like 34
    NP_001078615.1
    • serine carboxypeptidase-like 34 (SCPL34); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 35 (TAIR:AT5G08260.1); Has 3778 Blast hits to 3739 proteins in 432 species: Archae - 0; Bacteria - 325; Metazoa - 627; Fungi - 832; Plants - 1505; Viruses - 0; Other Eukaryotes - 489 (source: NCBI BLink).
    NP_001078616.1
    • serine carboxypeptidase-like 34 (SCPL34); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 35 (TAIR:AT5G08260.1); Has 3216 Blast hits to 3181 proteins in 264 species: Archae - 0; Bacteria - 14; Metazoa - 612; Fungi - 819; Plants - 1476; Viruses - 0; Other Eukaryotes - 295 (source: NCBI BLink).
    NP_197712.2
    • serine carboxypeptidase-like 34 (SCPL34); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 35 (TAIR:AT5G08260.1); Has 3270 Blast hits to 3224 proteins in 265 species: Archae - 0; Bacteria - 14; Metazoa - 619; Fungi - 830; Plants - 1501; Viruses - 0; Other Eukaryotes - 306 (source: NCBI BLink).
    NP_851062.2
    • serine carboxypeptidase-like 34 (SCPL34); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 35 (TAIR:AT5G08260.1); Has 3785 Blast hits to 3735 proteins in 437 species: Archae - 0; Bacteria - 325; Metazoa - 634; Fungi - 858; Plants - 1544; Viruses - 0; Other Eukaryotes - 424 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      7810645..7815089
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_180731.3 → NP_851062.2  serine carboxypeptidase-like 34 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_851062.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q0WPR4, Q3E976, Q9FMX9
      UniProtKB/TrEMBL
      A0A5S9Y7E0, A0A7G2FEG1
      Conserved Domains (1) summary
      pfam00450
      Location:56 → 491
      Peptidase_S10; Serine carboxypeptidase

    2. NM_001085146.2 → NP_001078615.1  serine carboxypeptidase-like 34 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001078615.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9Y7E0, A8MQN9
      Conserved Domains (1) summary
      pfam00450
      Location:56 → 448
      Peptidase_S10; Serine carboxypeptidase

    3. NM_122227.2 → NP_197712.2  serine carboxypeptidase-like 34 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_197712.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4KCT5
      Conserved Domains (1) summary
      pfam00450
      Location:8 → 395
      Peptidase_S10; Serine carboxypeptidase

    4. NM_001085147.2 → NP_001078616.1  serine carboxypeptidase-like 34 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001078616.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q0WPR4
      Conserved Domains (1) summary
      pfam00450
      Location:8 → 352
      Peptidase_S10; Serine carboxypeptidase

    5. NM_001343793.1 → NP_001331558.1  serine carboxypeptidase-like 34 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BEA9, A0A5S9Y7E0
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q0WPR4.2

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