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    RAN4 ras-related nuclear protein 4 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835599, updated on 18-Sep-2024

    Summary

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    Official Symbol
    RAN4
    Official Full Name
    ras-related nuclear protein 4
    Primary source
    TAIR:AT5G55080
    Locus tag
    AT5G55080
    See related
    Araport:AT5G55080
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtRAN4; MCO15.3; MCO15_3; ras-related nuclear protein 4
    Summary
    A member of RAN GTPase gene family.
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    Genomic context

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    See RAN4 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    6
    Sequence:
    Chromosome: 5; NC_003076.8 (22351576..22353058, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Rab3 GTPase-activating protein catalytic subunit Neighboring gene Dihydrolipoamide succinyltransferase Neighboring gene mitogen-activated protein kinase kinase kinase 15 Neighboring gene SWAP (Suppressor-of-White-APricot)/surp domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in nucleocytoplasmic transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    ras-related nuclear protein 4
    NP_200319.1
    • ras-related nuclear protein 4 (RAN4); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: intracellular protein transport, signal transduction, nucleocytoplasmic transport; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.10 ten leaves visible, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Ran GTPase (InterPro:IPR002041), Small GTP-binding protein (InterPro:IPR005225), Ras (InterPro:IPR013753); BEST Arabidopsis thaliana protein match is: RAN GTPase 3 (TAIR:AT5G55190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      22351576..22353058 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_124890.1 → NP_200319.1  ras-related nuclear protein 4 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_200319.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FLQ3
      UniProtKB/TrEMBL
      A0A7G2FKP8
      Conserved Domains (2) summary
      PLN03071
      Location:1 → 219
      PLN03071; GTP-binding nuclear protein Ran; Provisional
      cd00877
      Location:14 → 179
      Ran; Ras-related nuclear proteins (Ran)/TC4 family of small GTPases
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FLQ3.1

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