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    DiT2.2 dicarboxylate transporter 2.2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836549, updated on 18-Sep-2024

    Summary

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    Official Symbol
    DiT2.2
    Official Full Name
    dicarboxylate transporter 2.2
    Primary source
    TAIR:AT5G64280
    Locus tag
    AT5G64280
    See related
    Araport:AT5G64280
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    dicarboxylate transporter 2.2; MSJ1.12; MSJ1_12
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    Genomic context

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    See DiT2.2 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    4
    Sequence:
    Chromosome: 5; NC_003076.8 (25710999..25713574, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Aldolase-type TIM barrel family protein Neighboring gene metacaspase 3 Neighboring gene EXORDIUM like 2 Neighboring gene splicing factor Neighboring gene dicarboxylate transport 2.1 Neighboring gene GTP cyclohydrolase II

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Nikolovski N, et al. Plant Physiol, 2012 Oct. PMID 22923678, Free PMC Article
    2. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_125824.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables oxoglutarate:malate antiporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    located_in plastid HDA PubMed 

    General protein information

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    Preferred Names
    dicarboxylate transporter 2.2
    NP_201233.1
    • dicarboxylate transporter 2.2 (DiT2.2); FUNCTIONS IN: oxoglutarate:malate antiporter activity; INVOLVED IN: malate transport, sodium ion transport, transmembrane transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sodium/sulphate symporter (InterPro:IPR001898); BEST Arabidopsis thaliana protein match is: dicarboxylate transport 2.1 (TAIR:AT5G64290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      25710999..25713574 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_125824.4 → NP_201233.1  dicarboxylate transporter 2.2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_201233.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FMF8
      UniProtKB/TrEMBL
      A0A178U7Y9, A0A5S9YGX9
      Conserved Domains (2) summary
      TIGR00785
      Location:100 → 543
      dass; anion transporter
      cl21473
      Location:80 → 548
      ArsB_NhaD_permease; Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FMF8.1

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