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    MC3 metacaspase 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836545, updated on 18-Sep-2024

    Summary

    Official Symbol
    MC3
    Official Full Name
    metacaspase 3
    Primary source
    TAIR:AT5G64240
    Locus tag
    AT5G64240
    See related
    Araport:AT5G64240
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtMC3; AtMCP1a; MCP1a; metacaspase 1a; metacaspase 3; MSJ1.8; MSJ1_8
    Summary
    Encodes a type I metacaspase. Two Arabidopsis metacaspases, AT1G02170 (MC1) and AT4G25110 (MC2) antagonistically control programmed cell death in Arabidopsis. MC1 is a positive regulator of cell death and requires conserved caspase-like putative catalytic residues for its function. MC2 negatively regulates cell death. This function is independent of the putative catalytic residues. A third type I Arabidopsis metacaspase is MC3 (AT5g64240).
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    Genomic context

    See MC3 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    3
    Sequence:
    Chromosome: 5; NC_003076.8 (25695620..25697416)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene 1,8-cineole synthase Neighboring gene miscRNA Neighboring gene Aldolase-type TIM barrel family protein Neighboring gene EXORDIUM like 2 Neighboring gene splicing factor Neighboring gene dicarboxylate transporter 2.2

    General gene information

    NM_125820.3
    NM_180931.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables cysteine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
     

    General protein information

    Preferred Names
    metacaspase 3
    NP_201229.1
    • metacaspase 3 (MC3); FUNCTIONS IN: cysteine-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C14, caspase catalytic (InterPro:IPR011600); BEST Arabidopsis thaliana protein match is: metacaspase 1 (TAIR:AT1G02170.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
    NP_851262.1
    • metacaspase 3 (MC3); FUNCTIONS IN: cysteine-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C14, caspase catalytic (InterPro:IPR011600); BEST Arabidopsis thaliana protein match is: metacaspase 1 (TAIR:AT1G02170.1); Has 1094 Blast hits to 1088 proteins in 266 species: Archae - 4; Bacteria - 271; Metazoa - 0; Fungi - 282; Plants - 308; Viruses - 0; Other Eukaryotes - 229 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      25695620..25697416
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_180931.2NP_851262.1  metacaspase 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_851262.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      C0Z2J9, F4KDK6
      Conserved Domains (1) summary
      pfam00656
      Location:90281
      Peptidase_C14; Caspase domain
    2. NM_125820.3NP_201229.1  metacaspase 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_201229.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O82525, Q6XPT9, Q9FMG1
      UniProtKB/TrEMBL
      A0A5S9YHJ9, A0A654GDX5
      Conserved Domains (1) summary
      pfam00656
      Location:90326
      Peptidase_C14; Caspase domain