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    polyamine-modulated factor 1-binding protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 832632, updated on 18-Sep-2024

    Summary

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    Official Full Name
    polyamine-modulated factor 1-binding protein
    Primary source
    TAIR:AT5G25570
    Locus tag
    AT5G25570
    See related
    Araport:AT5G25570
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T14C9.110; T14C9_110
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    5
    Sequence:
    Chromosome: 5; NC_003076.8 (8901740..8903219)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Leucine-rich repeat (LRR) family protein Neighboring gene CHY-type/CTCHY-type/RING-type Zinc finger protein Neighboring gene uncharacterized protein Neighboring gene tRNA-Leu

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001203469.1
    NM_122468.3
    NM_203105.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    polyamine-modulated factor 1-binding protein
    NP_001190398.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages.
    NP_568475.1
    • unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_974834.1
    • unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      8901740..8903219
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_203105.2 → NP_974834.1  polyamine-modulated factor 1-binding protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974834.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UBM3, A0A5S9Y9J6, Q8LD64

    2. NM_122468.3 → NP_568475.1  polyamine-modulated factor 1-binding protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568475.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UBM3, A0A5S9Y9J6, Q8LD64

    3. NM_001203469.1 → NP_001190398.1  polyamine-modulated factor 1-binding protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190398.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4JY62
    Nucleotide Protein
    Heading Accession and Version

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