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    Cytochrome c oxidase biogenesis protein Cmc1-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831463, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Cytochrome c oxidase biogenesis protein Cmc1-like protein
    Primary source
    TAIR:AT5G16060
    Locus tag
    AT5G16060
    See related
    Araport:AT5G16060
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F1N13.200; F1N13_200
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    3
    Sequence:
    Chromosome: 5; NC_003076.8 (5246080..5247442)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene mental retardation GTPase activating protein Neighboring gene Regulator of chromosome condensation (RCC1) family protein Neighboring gene general regulatory factor 5 Neighboring gene TCP-1/cpn60 chaperonin family protein Neighboring gene carboxyesterase 17 Neighboring gene RAD23 UV excision repair family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    2. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_121611.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in plastid HDA PubMed 

    General protein information

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    Preferred Names
    Cytochrome c oxidase biogenesis protein Cmc1-like protein
    NP_197110.1
    • Cytochrome c oxidase biogenesis protein Cmc1-like; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase biogenesis protein Cmc1-like (InterPro:IPR013892); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      5246080..5247442
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_121611.5 → NP_197110.1  Cytochrome c oxidase biogenesis protein Cmc1-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_197110.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UR08, Q9LFR9
      Conserved Domains (1) summary
      pfam08583
      Location:21 → 86
      Cmc1; Cytochrome c oxidase biogenesis protein Cmc1 like
    Nucleotide Protein
    Heading Accession and Version

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