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    BRXL4 BREVIS RADIX-like 4 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 832176, updated on 18-Sep-2024

    Summary

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    Official Symbol
    BRXL4
    Official Full Name
    BREVIS RADIX-like 4
    Primary source
    TAIR:AT5G20540
    Locus tag
    AT5G20540
    See related
    Araport:AT5G20540
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATBRXL4; BREVIS RADIX-like 4; BRX-LIKE4; F7C8.130; F7C8_130
    Summary
    Belongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others, with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity.
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    Genomic context

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    See BRXL4 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    5
    Sequence:
    Chromosome: 5; NC_003076.8 (6947789..6952038)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene alfin-like 5 Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein Neighboring gene Glycosyl hydrolase superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. BRXL4-LAZY1 interaction at the plasma membrane controls Arabidopsis branch angle and gravitropism. Che X, et al. Plant J, 2023 Jan. PMID 36478485, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. BRXL4-LAZY1 interaction at the plasma membrane controls Arabidopsis branch angle and gravitropism.
      Title: BRXL4-LAZY1 interaction at the plasma membrane controls Arabidopsis branch angle and gravitropism.
    Submit: New GeneRIF Correction

    General gene information

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    NM_122061.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    BREVIS RADIX-like 4
    NP_197554.2
    • BREVIS RADIX-like 4 (BRXL4); CONTAINS InterPro DOMAIN/s: Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591); BEST Arabidopsis thaliana protein match is: DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein (TAIR:AT3G14000.2); Has 719 Blast hits to 410 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 715; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      6947789..6952038
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_122061.4 → NP_197554.2  BREVIS RADIX-like 4 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_197554.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8GZ92
      UniProtKB/TrEMBL
      A0A5S9Y665, A0A654G3A0
      Conserved Domains (2) summary
      pfam08381
      Location:328 → 383
      BRX; Transcription factor regulating root and shoot growth via Pin3
      pfam13713
      Location:28 → 51
      BRX_N; Transcription factor BRX N-terminal domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8GZ92.1

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