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    Plant invertase/pectin methylesterase inhibitor superfamily [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819130, updated on 18-Sep-2024

    Summary

    Official Full Name
    Plant invertase/pectin methylesterase inhibitor superfamily
    Primary source
    TAIR:AT2G45220
    Locus tag
    AT2G45220
    See related
    Araport:AT2G45220
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtPME17; F4L23.27; pectin methylesterase 17; PME17
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    Genomic context

    Location:
    chromosome: 2
    Exon count:
    2
    Sequence:
    Chromosome: 2; NC_003071.7 (18644061..18646606, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene golgi snare 12 Neighboring gene SAUR-like auxin-responsive protein family Neighboring gene pseudo Neighboring gene methionine aminopeptidase 1A

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    General gene information

    NM_130085.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables enzyme inhibitor activity  
    enables pectinesterase activity  
    Component Evidence Code Pubs
    located_in apoplast PubMed 
    located_in cytoplasmic stress granule PubMed 
    located_in extracellular region  

    General protein information

    Preferred Names
    Plant invertase/pectin methylesterase inhibitor superfamily
    NP_566038.1
    • Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: membrane, plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Carbohydrate-binding/sugar hydrolysis domain (InterPro:IPR006633), Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G51490.1); Has 2773 Blast hits to 2723 proteins in 340 species: Archae - 10; Bacteria - 616; Metazoa - 1; Fungi - 203; Plants - 1907; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      18644061..18646606 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_130085.4 → NP_566038.1  Plant invertase/pectin methylesterase inhibitor superfamily [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566038.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O22149, Q570I2, Q9ASU4
      UniProtKB/TrEMBL
      A0A178VY55, A0A5S9X771
      Conserved Domains (3) summary
      PLN02995
      Location:7 → 511
      PLN02995; Probable pectinesterase/pectinesterase inhibitor
      TIGR01614
      Location:2 → 176
      PME_inhib; pectinesterase inhibitor domain
      pfam01095
      Location:206 → 497
      Pectinesterase; Pectinesterase
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