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    TEX46 testis expressed 46 [ Homo sapiens (human) ]

    Gene ID: 729059, updated on 10-Dec-2024

    Summary

    Official Symbol
    TEX46provided by HGNC
    Official Full Name
    testis expressed 46provided by HGNC
    Primary source
    HGNC:HGNC:44651
    See related
    Ensembl:ENSG00000227868 AllianceGenome:HGNC:44651
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    TEX#; C1orf234
    Summary
    Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Restricted expression toward testis (RPKM 14.1) See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See TEX46 in Genome Data Viewer
    Location:
    1p36.12
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (23010834..23015852, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (22836535..22841556, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (23337327..23342345, complement)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene EPH receptor B2 Neighboring gene uncharacterized LOC124903874 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:23216005-23216210 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:23251233-23251733 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:23256871-23257055 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:23287810-23287985 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:23290925-23291425 Neighboring gene lactamase beta like 1 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr1:23336854-23338053 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:23345765-23346452 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:23346453-23347138 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 356 Neighboring gene lysine demethylase 1A Neighboring gene microRNA 3115 Neighboring gene leucine zipper protein 1 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:23459884-23460190 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:23466860-23467360 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:23467361-23467861 Neighboring gene RNA, U6 small nuclear 514, pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    General protein information

    Preferred Names
    testis-expressed protein 46
    Names
    uncharacterized protein C1orf234

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001242521.2NP_001229450.1  testis-expressed protein 46 precursor

      See identical proteins and their annotated locations for NP_001229450.1

      Status: VALIDATED

      Source sequence(s)
      AI652913, AL031428, BX351337, BX377446
      Consensus CDS
      CCDS57978.1
      UniProtKB/Swiss-Prot
      H3BR39, H3BTG2
      UniProtKB/TrEMBL
      A0A0D9SG37
      Related
      ENSP00000457161.1, ENST00000566855.4

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

      Range
      23010834..23015852 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060925.1 Alternate T2T-CHM13v2.0

      Range
      22836535..22841556 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)