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    UPK2 uroplakin 2 [ Homo sapiens (human) ]

    Gene ID: 7379, updated on 10-Dec-2024

    Summary

    Official Symbol
    UPK2provided by HGNC
    Official Full Name
    uroplakin 2provided by HGNC
    Primary source
    HGNC:HGNC:12579
    See related
    Ensembl:ENSG00000110375 MIM:611558; AllianceGenome:HGNC:12579
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    UP2; UPII
    Summary
    This gene encodes one of the proteins of the highly conserved urothelium-specific integral membrane proteins of the asymmetric unit membrane which forms urothelium apical plaques in mammals. The asymmetric unit membrane is believed to strengthen the urothelium by preventing cell rupture during bladder distention. The encoded protein is expressed in the peripheral blood of bladder cancer patients with transitional cell carcinomas.[provided by RefSeq, Sep 2009]
    Expression
    Biased expression in urinary bladder (RPKM 26.3) and fat (RPKM 1.3) See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See UPK2 in Genome Data Viewer
    Location:
    11q23.3
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (118956298..118958559)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (118976691..118978952)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (118827008..118829269)

    Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene BCL9 like Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:118781595-118782134 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr11:118782402-118783601 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5609 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:118784843-118785382 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:118785383-118785924 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:118787549-118788090 Neighboring gene microRNA 4492 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:118788631-118789172 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:118792419-118792959 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:118794043-118794583 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:118794584-118795123 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5610 Neighboring gene H3K27ac hESC enhancer GRCh37_chr11:118795793-118796294 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3957 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3958 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3959 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:118798447-118798948 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5611 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5612 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5613 Neighboring gene RNA, 7SL, cytoplasmic 688, pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:118810343-118811124 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:118811125-118811904 Neighboring gene H3K27ac hESC enhancer GRCh37_chr11:118842491-118842991 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:118850851-118851369 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:118851370-118851887 Neighboring gene forkhead box R1 Neighboring gene uncharacterized LOC124902768

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Clone Names

    • MGC138598

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in epithelial cell differentiation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in epithelial cell differentiation IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in apical plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in extracellular exosome HDA PubMed 
    located_in plasma membrane TAS
    Traceable Author Statement
    more info
    PubMed 

    General protein information

    Preferred Names
    uroplakin-2
    Names
    uroplakin II

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_006760.4NP_006751.1  uroplakin-2 precursor

      See identical proteins and their annotated locations for NP_006751.1

      Status: REVIEWED

      Source sequence(s)
      CD556028, Y13645
      Consensus CDS
      CCDS8404.1
      UniProtKB/Swiss-Prot
      B0YJ92, O00457, O00526, Q53YV0
      Related
      ENSP00000264031.2, ENST00000264031.3
      Conserved Domains (1) summary
      cl06408
      Location:24184
      UP_III_II; Uroplakin IIIb, IIIa and II

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

      Range
      118956298..118958559
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060935.1 Alternate T2T-CHM13v2.0

      Range
      118976691..118978952
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)