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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001105528.4 → NP_001098998.1 coiled-coil domain-containing protein 178 isoform 1
See identical proteins and their annotated locations for NP_001098998.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) lacks an alternate in-frame exon in the 3' coding region, compared to variant 3, resulting in a shorter protein (isoform 1), compared to isoform 3.
- Source sequence(s)
-
AC025888, AC104956, AK000027, AK126038, BC091517, BC130535
- Consensus CDS
-
CCDS42424.1
- UniProtKB/Swiss-Prot
- A6NDC6, J3KS92, Q5BJE1, Q6ZP67, Q6ZU20
- UniProtKB/TrEMBL
-
A1L4G8
- Related
- ENSP00000372576.3, ENST00000383096.8
- Conserved Domains (1) summary
-
- COG1196
Location:143 → 406
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
-
NM_001308126.3 → NP_001295055.1 coiled-coil domain-containing protein 178 isoform 3
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) represents the longest transcript and encodes the longest isoform (3).
- Source sequence(s)
-
AC025888, AC104956, AC116607, AK000027, AK126038, BC091517, BC144178
- Consensus CDS
-
CCDS77174.1
- UniProtKB/TrEMBL
- B7ZM04, F8W7A7
- Related
- ENSP00000463254.1, ENST00000583930.5
- Conserved Domains (1) summary
-
- COG1196
Location:143 → 406
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
-
NM_001371120.1 → NP_001358049.1 coiled-coil domain-containing protein 178 isoform 3
Status: VALIDATED
- Source sequence(s)
-
AC025888, AC104956, AC116607, AK000027, BC091517, BC144178
- Consensus CDS
-
CCDS77174.1
- UniProtKB/TrEMBL
- B7ZM04, F8W7A7
- Conserved Domains (1) summary
-
- COG1196
Location:143 → 406
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
-
NM_001371121.1 → NP_001358050.1 coiled-coil domain-containing protein 178 isoform 3
Status: VALIDATED
- Source sequence(s)
-
AC025888, AC104956, AC116607, AK000027, BC091517, BC144178
- Consensus CDS
-
CCDS77174.1
- UniProtKB/TrEMBL
- B7ZM04, F8W7A7
- Conserved Domains (1) summary
-
- COG1196
Location:143 → 406
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
-
NM_198995.3 → NP_945346.2 coiled-coil domain-containing protein 178 isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR and lacks two alternate in-frame exons in the coding region, compared to variant 3, resulting in a shorter protein (isoform 2), compared to isoform 3.
- Source sequence(s)
-
AC025888, AC104956, AC116607, AK000027, AK126038, BC091517, BC130535
- Consensus CDS
-
CCDS11906.1
- UniProtKB/TrEMBL
-
A1L4G8
- Related
- ENSP00000300227.8, ENST00000300227.12
- Conserved Domains (1) summary
-
- COG1196
Location:158 → 776
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000018.10 Reference GRCh38.p14 Primary Assembly
- Range
-
32937406..33441040 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011525951.2 → XP_011524253.1 coiled-coil domain-containing protein 178 isoform X1
- UniProtKB/TrEMBL
-
A1L4G8
- Conserved Domains (1) summary
-
- COG1196
Location:143 → 406
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
-
XM_017025724.2 → XP_016881213.1 coiled-coil domain-containing protein 178 isoform X2
- UniProtKB/TrEMBL
-
B7ZM04
-
XM_017025725.1 → XP_016881214.1 coiled-coil domain-containing protein 178 isoform X2
- UniProtKB/TrEMBL
-
B7ZM04
-
XM_011525954.3 → XP_011524256.1 coiled-coil domain-containing protein 178 isoform X3
- Conserved Domains (1) summary
-
- COG1196
Location:143 → 406
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
-
XM_011525955.2 → XP_011524257.1 coiled-coil domain-containing protein 178 isoform X4
- Conserved Domains (1) summary
-
- COG1196
Location:143 → 406
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
Alternate T2T-CHM13v2.0
Genomic
-
NC_060942.1 Alternate T2T-CHM13v2.0
- Range
-
33129211..33632807 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054318570.1 → XP_054174545.1 coiled-coil domain-containing protein 178 isoform X1
- UniProtKB/TrEMBL
-
A1L4G8
-
XM_054318572.1 → XP_054174547.1 coiled-coil domain-containing protein 178 isoform X2
- UniProtKB/TrEMBL
-
B7ZM04
-
XM_054318571.1 → XP_054174546.1 coiled-coil domain-containing protein 178 isoform X2
- UniProtKB/TrEMBL
-
B7ZM04
-
XM_054318573.1 → XP_054174548.1 coiled-coil domain-containing protein 178 isoform X3
-
XM_054318574.1 → XP_054174549.1 coiled-coil domain-containing protein 178 isoform X4