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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_007569.1 RefSeqGene
- Range
-
4807..66294
- Download
- GenBank, FASTA, Sequence Viewer (Graphics), LRG_48
mRNA and Protein(s)
-
NM_000204.5 → NP_000195.3 complement factor I isoform 2 preproprotein
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) encodes isoform 2.
- Source sequence(s)
-
AC126283
- Consensus CDS
-
CCDS34049.1
- UniProtKB/Swiss-Prot
- O60442, P05156
- UniProtKB/TrEMBL
-
A8K3L0
- Related
- ENSP00000378130.2, ENST00000394634.7
- Conserved Domains (5) summary
-
- smart00057
Location:43 → 108
- FIMAC; factor I membrane attack complex
- smart00202
Location:114 → 215
- SR; Scavenger receptor Cys-rich
- cd00112
Location:224 → 256
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- cd00190
Location:340 → 572
- Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
- pfam00057
Location:257 → 293
- Ldl_recept_a; Low-density lipoprotein receptor domain class A
-
NM_001318057.2 → NP_001304986.2 complement factor I isoform 1 preproprotein
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) contains an alternate in-frame exon compared to variant 2. The encoded isoform (1) is longer than isoform 2.
- Source sequence(s)
-
AC126283
- Consensus CDS
-
CCDS82946.1
- UniProtKB/TrEMBL
- B4DRF2, E7ETH0
- Related
- ENSP00000378131.3, ENST00000394635.8
- Conserved Domains (5) summary
-
- smart00057
Location:43 → 108
- FIMAC; factor I membrane attack complex
- smart00202
Location:114 → 215
- SR; Scavenger receptor Cys-rich
- cd00112
Location:224 → 256
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- cd00190
Location:348 → 580
- Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
- pfam00057
Location:257 → 293
- Ldl_recept_a; Low-density lipoprotein receptor domain class A
-
NM_001331035.2 → NP_001317964.1 complement factor I isoform 3 preproprotein
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) lacks an alternate in-frame exon in the central coding region compared to variant 2. The encoded isoform (3) lacks a portion of the heavy chain compared to isoform 2.
- Source sequence(s)
-
AK290625, BM955734, BX453590, DC392360, J02770, N63668
- Consensus CDS
-
CCDS82945.1
- UniProtKB/TrEMBL
- A8K3L0, G3XAM2
- Related
- ENSP00000427438.1, ENST00000512148.5
- Conserved Domains (7) summary
-
- smart00020
Location:332 → 562
- Tryp_SPc; Trypsin-like serine protease
- smart00057
Location:43 → 108
- FIMAC; factor I membrane attack complex
- smart00202
Location:114 → 215
- SR; Scavenger receptor Cys-rich
- cd00112
Location:224 → 256
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- cd00190
Location:333 → 565
- Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
- pfam00057
Location:257 → 293
- Ldl_recept_a; Low-density lipoprotein receptor domain class A
- pfam00530
Location:119 → 214
- SRCR; Scavenger receptor cysteine-rich domain
-
NM_001375278.1 → NP_001362207.1 complement factor I isoform 4 preproprotein
Status: REVIEWED
- Source sequence(s)
-
AC004067, AC126283
- UniProtKB/TrEMBL
-
B4DRF2
- Conserved Domains (5) summary
-
- smart00057
Location:43 → 108
- FIMAC; factor I membrane attack complex
- smart00202
Location:114 → 215
- SR; Scavenger receptor Cys-rich
- cd00112
Location:224 → 256
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- cd00190
Location:348 → 519
- Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
- pfam00057
Location:257 → 293
- Ldl_recept_a; Low-density lipoprotein receptor domain class A
-
NM_001375279.1 → NP_001362208.1 complement factor I isoform 5 preproprotein
Status: REVIEWED
- Source sequence(s)
-
AC004067, AC126283
- UniProtKB/TrEMBL
-
A8K3L0
- Related
-
ENST00000695844.1
- Conserved Domains (5) summary
-
- smart00057
Location:43 → 108
- FIMAC; factor I membrane attack complex
- smart00202
Location:114 → 215
- SR; Scavenger receptor Cys-rich
- cd00112
Location:224 → 256
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- cd00190
Location:340 → 511
- Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
- pfam00057
Location:257 → 293
- Ldl_recept_a; Low-density lipoprotein receptor domain class A
-
NM_001375280.1 → NP_001362209.1 complement factor I isoform 6 preproprotein
Status: REVIEWED
- Source sequence(s)
-
AC004067, AC126283
- UniProtKB/TrEMBL
-
A8K3L0
- Conserved Domains (5) summary
-
- smart00057
Location:43 → 108
- FIMAC; factor I membrane attack complex
- smart00202
Location:114 → 215
- SR; Scavenger receptor Cys-rich
- cd00112
Location:224 → 256
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- cd00190
Location:333 → 504
- Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
- pfam00057
Location:257 → 293
- Ldl_recept_a; Low-density lipoprotein receptor domain class A
-
NM_001375281.1 → NP_001362210.1 complement factor I isoform 7 preproprotein
Status: REVIEWED
- Source sequence(s)
-
AC004067, AC126283
- UniProtKB/TrEMBL
-
A8K3L0
- Related
-
ENST00000695845.1
- Conserved Domains (5) summary
-
- smart00020
Location:339 → 511
- Tryp_SPc; Trypsin-like serine protease
- smart00057
Location:43 → 108
- FIMAC; factor I membrane attack complex
- smart00202
Location:114 → 215
- SR; Scavenger receptor Cys-rich
- cd00112
Location:224 → 256
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- pfam00057
Location:257 → 293
- Ldl_recept_a; Low-density lipoprotein receptor domain class A
-
NM_001375282.1 → NP_001362211.1 complement factor I isoform 8 preproprotein
Status: REVIEWED
- Source sequence(s)
-
AC004067, AC126283
- UniProtKB/TrEMBL
-
A8K3L0
- Conserved Domains (5) summary
-
- smart00020
Location:332 → 504
- Tryp_SPc; Trypsin-like serine protease
- smart00057
Location:43 → 108
- FIMAC; factor I membrane attack complex
- smart00202
Location:114 → 215
- SR; Scavenger receptor Cys-rich
- cd00112
Location:224 → 256
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- pfam00057
Location:257 → 293
- Ldl_recept_a; Low-density lipoprotein receptor domain class A
-
NM_001375283.1 → NP_001362212.1 complement factor I isoform 9 preproprotein
Status: REVIEWED
- Source sequence(s)
-
AC126283
- UniProtKB/TrEMBL
-
A8K3L0
- Conserved Domains (5) summary
-
- smart00057
Location:43 → 108
- FIMAC; factor I membrane attack complex
- smart00202
Location:114 → 215
- SR; Scavenger receptor Cys-rich
- cd00112
Location:224 → 256
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- cd00190
Location:321 → 553
- Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
- pfam00057
Location:257 → 293
- Ldl_recept_a; Low-density lipoprotein receptor domain class A
-
NM_001375284.1 → NP_001362213.1 complement factor I isoform 10
Status: REVIEWED
- Source sequence(s)
-
AC126283
- Conserved Domains (3) summary
-
- cd00112
Location:21 → 53
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- cd00190
Location:137 → 369
- Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
- pfam00057
Location:54 → 90
- Ldl_recept_a; Low-density lipoprotein receptor domain class A
RNA
-
NR_164671.1 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AC126283
-
NR_164672.1 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AC126283
-
NR_164673.1 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AC126283
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000004.12 Reference GRCh38.p14 Primary Assembly
- Range
-
109730982..109801999 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011531920.3 → XP_011530222.1 complement factor I isoform X1
- UniProtKB/TrEMBL
-
B4DRF2
- Conserved Domains (8) summary
-
- smart00020
Location:347 → 519
- Tryp_SPc; Trypsin-like serine protease
- smart00057
Location:43 → 108
- FIMAC; factor I membrane attack complex
- smart00202
Location:114 → 215
- SR; Scavenger receptor Cys-rich
- cd00112
Location:224 → 256
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- cd00190
Location:348 → 519
- Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
- pfam00057
Location:257 → 293
- Ldl_recept_a; Low-density lipoprotein receptor domain class A
- pfam00530
Location:119 → 214
- SRCR; Scavenger receptor cysteine-rich domain
- pfam13900
Location:524 → 555
- GVQW; Putative domain of unknown function
-
XM_047415653.1 → XP_047271609.1 complement factor I isoform X2
- UniProtKB/TrEMBL
-
B4DRF2
-
XM_047415654.1 → XP_047271610.1 complement factor I isoform X4
- UniProtKB/TrEMBL
-
A8K3L0
-
XM_006714210.5 → XP_006714273.1 complement factor I isoform X3
- UniProtKB/TrEMBL
-
B4DRF2
- Conserved Domains (7) summary
-
- smart00020
Location:347 → 520
- Tryp_SPc; Trypsin-like serine protease
- smart00057
Location:43 → 108
- FIMAC; factor I membrane attack complex
- smart00202
Location:114 → 215
- SR; Scavenger receptor Cys-rich
- cd00112
Location:224 → 256
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- cd00190
Location:348 → 520
- Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
- pfam00057
Location:257 → 293
- Ldl_recept_a; Low-density lipoprotein receptor domain class A
- pfam00530
Location:119 → 214
- SRCR; Scavenger receptor cysteine-rich domain
Alternate T2T-CHM13v2.0
Genomic
-
NC_060928.1 Alternate T2T-CHM13v2.0
- Range
-
113031939..113104052 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054349941.1 → XP_054205916.1 complement factor I isoform X6
- UniProtKB/TrEMBL
-
A8K3L0
-
XM_054349940.1 → XP_054205915.1 complement factor I isoform X1
- UniProtKB/TrEMBL
-
B4DRF2
-
XM_054349944.1 → XP_054205919.1 complement factor I isoform X8
- UniProtKB/TrEMBL
-
A8K3L0
-
XM_054349943.1 → XP_054205918.1 complement factor I isoform X7
- UniProtKB/TrEMBL
-
B4DRF2
-
XM_054349942.1 → XP_054205917.1 complement factor I isoform X2
- UniProtKB/TrEMBL
-
B4DRF2
-
XM_054349947.1 → XP_054205922.1 complement factor I isoform X4
- UniProtKB/TrEMBL
-
A8K3L0
-
XM_054349946.1 → XP_054205921.1 complement factor I isoform X9
- UniProtKB/TrEMBL
-
A8K3L0
-
XM_054349939.1 → XP_054205914.1 complement factor I isoform X5
- UniProtKB/TrEMBL
-
B4DRF2
-
XM_054349945.1 → XP_054205920.1 complement factor I isoform X3
- UniProtKB/TrEMBL
-
B4DRF2