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    gpam.S glycerol-3-phosphate acyltransferase, mitochondrial S homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 100037242, updated on 4-Jan-2025

    Summary

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    Official Symbol
    gpam.S
    Official Full Name
    glycerol-3-phosphate acyltransferase, mitochondrial S homeolog
    Primary source
    Xenbase:XB-GENE-6254972
    Locus tag
    XELAEV_18036614mg
    See related
    EnsemblRapid:ENSXLAG00005018489 AllianceGenome:Xenbase:XB-GENE-6254972
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    gpam; gpat; gpat1
    Summary
    Predicted to enable glycerol-3-phosphate O-acyltransferase activity. Predicted to act upstream of or within CDP-diacylglycerol biosynthetic process. Predicted to be located in mitochondrial outer membrane and plasma membrane. Is expressed in anatomical system; ectoderm; mesenchyme; and pharyngeal arch. Orthologous to human GPAM (glycerol-3-phosphate acyltransferase, mitochondrial). [provided by Alliance of Genome Resources, Jan 2025]
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    Genomic context

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    See gpam.S in Genome Data Viewer
    Location:
    chromosome: 7S
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 7S NC_054384.1 (890443..913028)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 7S NC_030737.1 (908896..932017)

    Chromosome 7S - NC_054384.1Genomic Context describing neighboring genes Neighboring gene inositol 1,4,5-trisphosphate receptor interacting protein S homeolog Neighboring gene tectorin beta S homeolog Neighboring gene lamina-associated polypeptide 2-like Neighboring gene adrenoceptor alpha 2A S homeolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables acyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables glycerol-3-phosphate O-acyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within CDP-diacylglycerol biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within phospholipid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrial membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in mitochondrial outer membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    glycerol-3-phosphate acyltransferase, mitochondrial S homeolog
    Names
    mitochondrial glycerol 3-phosphate acyltransferase
    NP_001091387.1
    XP_041426217.1
    XP_041426218.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001097918.1 → NP_001091387.1  glycerol-3-phosphate acyltransferase, mitochondrial S homeolog

      See identical proteins and their annotated locations for NP_001091387.1

      Status: PROVISIONAL

      Source sequence(s)
      BC128670
      UniProtKB/TrEMBL
      A0A974CBS1, A1A5I8
      Related
      ENSXLAP00005054671.1, ENSXLAT00005055845.1
      Conserved Domains (2) summary
      cd07993
      Location:199 → 410
      LPLAT_DHAPAT-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT-like
      COG2937
      Location:34 → 669
      PlsB; Glycerol-3-phosphate O-acyltransferase [Lipid transport and metabolism]

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054384.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      890443..913028
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_041570284.1 → XP_041426218.1  glycerol-3-phosphate acyltransferase, mitochondrial S homeolog isoform X2

      UniProtKB/TrEMBL
      A0A8J1L9K5, A0A974CBS1
      Related
      ENSXLAP00005054683.1, ENSXLAT00005055857.1
      Conserved Domains (2) summary
      cd07993
      Location:218 → 429
      LPLAT_DHAPAT-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT-like
      COG2937
      Location:53 → 688
      PlsB; Glycerol-3-phosphate O-acyltransferase [Lipid transport and metabolism]

    2. XM_041570283.1 → XP_041426217.1  glycerol-3-phosphate acyltransferase, mitochondrial S homeolog isoform X1

      UniProtKB/TrEMBL
      A0A8J1L9K3, A0A974CBS1
      Conserved Domains (2) summary
      cd07993
      Location:242 → 453
      LPLAT_DHAPAT-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT-like
      COG2937
      Location:77 → 712
      PlsB; Glycerol-3-phosphate O-acyltransferase [Lipid transport and metabolism]
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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