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    Apln apelin [ Mus musculus (house mouse) ]

    Gene ID: 30878, updated on 27-Nov-2024

    Summary

    Official Symbol
    Aplnprovided by MGI
    Official Full Name
    apelinprovided by MGI
    Primary source
    MGI:MGI:1353624
    See related
    Ensembl:ENSMUSG00000037010 AllianceGenome:MGI:1353624
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Apel; 6030430G11Rik
    Summary
    This gene encodes the neuropeptide Apelin, an endogenous ligand of the G protein-coupled receptor APJ. This gene is highly expressed in the central nervous system and peripheral tissues and the encoded preproprotein undergoes proteolytic processing to generate mature peptides of different sizes that are secreted into the plasma. These peptides play important roles in a broad range of physiological processes such as cardiac contractility, blood pressure, blood vessel growth, appetite and drink behavior, and pituitary hormone secretion. Mice lacking the encoded protein develop progressive heart failure and exhibit a shorter bleeding time, prothrombotic profile and increased bone mass. [provided by RefSeq, Jul 2016]
    Expression
    Broad expression in lung adult (RPKM 12.2), cortex adult (RPKM 7.1) and 19 other tissues See more
    Orthologs
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    Genomic context

    See Apln in Genome Data Viewer
    Location:
    X A4; X 25.48 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (47114023..47123730, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (48025146..48034853, complement)

    Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene predicted gene, 36658 Neighboring gene calmodulin 2 pseudogene Neighboring gene STARR-seq mESC enhancer starr_47100 Neighboring gene STARR-seq mESC enhancer starr_47102 Neighboring gene X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound Neighboring gene CapStarr-seq enhancer MGSCv37_chrX:45490128-45490351 Neighboring gene CapStarr-seq enhancer MGSCv37_chrX:45494812-45494921 Neighboring gene SAM and SH3 domain containing 3

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (5) 
    • Targeted (10)  1 citation

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables apelin receptor binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables apelin receptor binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables hormone activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables hormone activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables identical protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables signaling receptor binding ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within G protein-coupled receptor signaling pathway ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    involved_in angiogenesis IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in apelin receptor signaling pathway IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in apelin receptor signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in apelin receptor signaling pathway ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in coronary vasculature development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in drinking behavior ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in drinking behavior ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in feeding behavior ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in gastrulation IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of blood pressure ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of blood pressure ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in negative regulation of fibroblast growth factor receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of fibroblast growth factor receptor signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of gene expression IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of gene expression ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of systemic arterial blood pressure ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of vascular associated smooth muscle cell proliferation IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of vascular associated smooth muscle cell proliferation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of vasoconstriction ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of G protein-coupled receptor internalization IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in positive regulation of G protein-coupled receptor internalization ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of cell population proliferation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of corticotropin secretion ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of corticotropin-releasing hormone secretion ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of heart contraction ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of heart contraction ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in positive regulation of heart rate ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of heat generation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of miRNA transcription IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of miRNA transcription ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of phosphorylation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of vascular endothelial cell proliferation IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of vascular endothelial cell proliferation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of body fluid levels ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of the force of heart contraction ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in extracellular region ISO
    Inferred from Sequence Orthology
    more info
     
    located_in extracellular region ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in extracellular space ISO
    Inferred from Sequence Orthology
    more info
     
    located_in perinuclear region of cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    apelin
    Names
    APJ endogenous ligand
    preproapelin

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_013912.4NP_038940.1  apelin preproprotein

      See identical proteins and their annotated locations for NP_038940.1

      Status: REVIEWED

      Source sequence(s)
      AL672274, DQ832282
      Consensus CDS
      CCDS40958.1
      UniProtKB/Swiss-Prot
      Q9R0R4
      UniProtKB/TrEMBL
      Q544B5
      Related
      ENSMUSP00000046012.8, ENSMUST00000039026.8
      Conserved Domains (1) summary
      pfam15360
      Location:2377
      Apelin; APJ endogenous ligand

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000086.8 Reference GRCm39 C57BL/6J

      Range
      47114023..47123730 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)