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    Ccdc179 coiled-coil domain containing 179 [ Mus musculus (house mouse) ]

    Gene ID: 100503036, updated on 27-Nov-2024

    Summary

    Official Symbol
    Ccdc179provided by MGI
    Official Full Name
    coiled-coil domain containing 179provided by MGI
    Primary source
    MGI:MGI:1922779
    See related
    Ensembl:ENSMUSG00000094445 AllianceGenome:MGI:1922779
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    1700015G11Rik
    Summary
    Orthologous to human CCDC179 (coiled-coil domain containing 179). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Restricted expression toward testis adult (RPKM 70.4) See more
    Orthologs
    NEW
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    Genomic context

    See Ccdc179 in Genome Data Viewer
    Location:
    7 B4; 7 32.92 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (51661428..51665464, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (52011680..52015716, complement)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene Fanconi anemia, complementation group F Neighboring gene growth arrest specific 2 Neighboring gene STARR-seq mESC enhancer starr_18929 Neighboring gene STARR-seq mESC enhancer starr_18930 Neighboring gene STARR-positive B cell enhancer mm9_chr7:59261106-59261406 Neighboring gene small VCP/p97-interacting protein Neighboring gene karyopherin alpha 7 (importin alpha 8) pseudogene Neighboring gene predicted gene, 51482

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    coiled-coil domain-containing protein 179

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001195601.1NP_001182530.1  coiled-coil domain-containing protein 179

      See identical proteins and their annotated locations for NP_001182530.1

      Status: VALIDATED

      Source sequence(s)
      AC122017, AK005994, AV042221
      Consensus CDS
      CCDS57552.1
      UniProtKB/Swiss-Prot
      J3QM76
      UniProtKB/TrEMBL
      A0A087WSR9
      Related
      ENSMUSP00000136157.2, ENSMUST00000180038.8

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      51661428..51665464 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)