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    Gm29514 predicted gene 29514 [ Mus musculus (house mouse) ]

    Gene ID: 102639375, updated on 22-Oct-2024

    Summary

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    Official Symbol
    Gm29514provided by MGI
    Official Full Name
    predicted gene 29514provided by MGI
    Primary source
    MGI:MGI:5580220
    See related
    Ensembl:ENSMUSG00000099964 AllianceGenome:MGI:5580220
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See Gm29514 in Genome Data Viewer
    Location:
    1 F; 1
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (146302631..146370900, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (146426893..146495162, complement)

    Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_02554 Neighboring gene STARR-seq mESC enhancer starr_02555 Neighboring gene predicted gene, 41965 Neighboring gene STARR-seq mESC enhancer starr_02557 Neighboring gene STARR-seq mESC enhancer starr_02558 Neighboring gene STARR-seq mESC enhancer starr_02559 Neighboring gene STARR-seq mESC enhancer starr_02560 Neighboring gene acidic (leucine-rich) nuclear phosphoprotein 32 family, member B pseudogene Neighboring gene bone morphogenetic protein/retinoic acid inducible neural specific 3 Neighboring gene STARR-seq mESC enhancer starr_02561 Neighboring gene STARR-seq mESC enhancer starr_02562 Neighboring gene STARR-seq mESC enhancer starr_02563 Neighboring gene STARR-seq mESC enhancer starr_02565 Neighboring gene STARR-seq mESC enhancer starr_02566 Neighboring gene STARR-seq mESC enhancer starr_02567 Neighboring gene STARR-seq mESC enhancer starr_02569 Neighboring gene myosin IIIB pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article
    2. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    3. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    4. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
    5. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_166158.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL592462
      Related
      ENSMUST00000263088.1

    2. NR_166159.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL592462
      Related
      ENSMUST00000263089.1

    3. NR_166160.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL592462
      Related
      ENSMUST00000263091.1

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000067.7 Reference GRCm39 C57BL/6J

      Range
      146302631..146370900 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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