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    Cuzd1 CUB and zona pellucida-like domains 1 [ Mus musculus (house mouse) ]

    Gene ID: 16433, updated on 27-Nov-2024

    Summary

    Official Symbol
    Cuzd1provided by MGI
    Official Full Name
    CUB and zona pellucida-like domains 1provided by MGI
    Primary source
    MGI:MGI:1202881
    See related
    Ensembl:ENSMUSG00000040205 AllianceGenome:MGI:1202881
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Usg; Erg-1; Uo-44; Utczp; Itmap1
    Summary
    Involved in trypsinogen activation. Located in zymogen granule membrane. Orthologous to human CUZD1 (CUB and zona pellucida like domains 1). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Restricted expression toward genital fat pad adult (RPKM 834.5) See more
    Orthologs
    NEW
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    Genomic context

    See Cuzd1 in Genome Data Viewer
    Location:
    7 F3; 7 73.81 cM
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (130910283..130924021, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (131308554..131322292, complement)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 1700029B22 gene Neighboring gene CUB domain containing protein 3 Neighboring gene deleted in malignant brain tumors 1 pseudogene Neighboring gene family with sequence similarity 24 member B Neighboring gene family with sequence similarity 24, member A

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 
    • Targeted (3)  1 citation

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Process Evidence Code Pubs
    involved_in cell adhesion IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in cell division IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in female pregnancy NAS
    Non-traceable Author Statement
    more info
    PubMed 
    involved_in hormone-mediated signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in trypsinogen activation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in cell surface IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in membrane NAS
    Non-traceable Author Statement
    more info
    PubMed 
    located_in zymogen granule IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in zymogen granule membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    CUB and zona pellucida-like domain-containing protein 1
    Names
    CUB and ZP domain-containing protein 1
    integral membrane-associated protein 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_008411.3NP_032437.3  CUB and zona pellucida-like domain-containing protein 1 precursor

      See identical proteins and their annotated locations for NP_032437.3

      Status: VALIDATED

      Source sequence(s)
      AC110885, AC156606, BY707834, BY707920
      Consensus CDS
      CCDS40157.1
      UniProtKB/Swiss-Prot
      B2RU69, P70412, Q9CTZ7
      Related
      ENSMUSP00000037168.8, ENSMUST00000046611.9
      Conserved Domains (4) summary
      smart00042
      Location:55143
      CUB; Domain first found in C1r, C1s, uEGF, and bone morphogenetic protein
      smart00241
      Location:277519
      ZP; Zona pellucida (ZP) domain
      pfam00100
      Location:400517
      Zona_pellucida; Zona pellucida-like domain
      pfam00431
      Location:154262
      CUB; CUB domain

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      130910283..130924021 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)