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    CYCP4;1 cyclin p4;1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819082, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CYCP4;1
    Official Full Name
    cyclin p4;1
    Primary source
    TAIR:AT2G44740
    Locus tag
    AT2G44740
    See related
    Araport:AT2G44740
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    cyclin p4;1; F16B22.23
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    Genomic context

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    See CYCP4;1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    2
    Sequence:
    Chromosome: 2; NC_003071.7 (18441828..18443405, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Alcohol dehydrogenase transcription factor Myb/SANT-like family protein Neighboring gene uncharacterized protein Neighboring gene miscRNA Neighboring gene WRKY family transcription factor

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Molecular characterization of Arabidopsis PHO80-like proteins, a novel class of CDKA;1-interacting cyclins. Torres Acosta JA, et al. Cell Mol Life Sci, 2004 Jun. PMID 15197472, Free PMC Article
    2. Extensive signal integration by the phytohormone protein network. Altmann M, et al. Nature, 2020 Jul. PMID 32612234
    3. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_130038.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables protein kinase binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    cyclin p4;1
    NP_182002.1
    • cyclin p4;1 (CYCP4;1); CONTAINS InterPro DOMAIN/s: Negative regulatory factor PREG (InterPro:IPR012389), Cyclin-like (InterPro:IPR011028), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN P4;2 (TAIR:AT5G61650.1); Has 1474 Blast hits to 1416 proteins in 218 species: Archae - 0; Bacteria - 18; Metazoa - 247; Fungi - 710; Plants - 236; Viruses - 0; Other Eukaryotes - 263 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      18441828..18443405 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_130038.4 → NP_182002.1  cyclin p4;1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_182002.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O80513
      UniProtKB/TrEMBL
      A0A178VXY9, A0A5S9X7Q7
      Conserved Domains (1) summary
      cd20604
      Location:40 → 165
      CYCLIN_AtCycU-like; cyclin box found in Arabidopsis thaliana U-type cyclins (CycUs) and similar proteins
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O80513.1

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