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    Target of Myb protein 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 844033, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Target of Myb protein 1
    Primary source
    TAIR:AT1G76970
    Locus tag
    AT1G76970
    See related
    Araport:AT1G76970
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F22K20.7; F22K20_7
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    9
    Sequence:
    Chromosome: 1; NC_003070.9 (28922415..28925468, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene patatin-like phospholipase domain protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Protein-Protein Interaction Network and Subcellular Localization of the Arabidopsis Thaliana ESCRT Machinery. Richardson LG, et al. Front Plant Sci, 2011. PMID 22639582, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001334751.1
    NM_001334752.1
    NM_001334753.1
    NM_001334754.1
    NM_001334755.1
    NM_001334756.1
    NM_106348.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables phosphatidylinositol binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ubiquitin binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in Golgi apparatus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Target of Myb protein 1
    NP_177823.2
    • Target of Myb protein 1; FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, intra-Golgi vesicle-mediated transport; LOCATED IN: Golgi stack, intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: VHS (InterPro:IPR002014), Target of Myb protein 1 (InterPro:IPR014645), GAT (InterPro:IPR004152), VHS subgroup (InterPro:IPR018205), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: Target of Myb protein 1 (TAIR:AT1G21380.1); Has 1693 Blast hits to 1685 proteins in 202 species: Archae - 0; Bacteria - 2; Metazoa - 883; Fungi - 448; Plants - 280; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      28922415..28925468 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_106348.4 → NP_177823.2  Target of Myb protein 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177823.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O49283, Q6NQK0
      UniProtKB/TrEMBL
      A0A178WMY8
      Conserved Domains (2) summary
      cd03561
      Location:10 → 135
      VHS; VHS domain family; The VHS domain is present in Vps27 (Vacuolar Protein Sorting), Hrs (Hepatocyte growth factor-regulated tyrosine kinase substrate) and STAM (Signal Transducing Adaptor Molecule). It has a superhelical structure similar to that of the ...
      cd14231
      Location:180 → 258
      GAT_GGA_like_plant; GAT domain found in uncharacterized Golgi-localized gamma ear-containing Arf-binding protein (GGA)-like proteins mainly found in plants

    2. NM_001334753.1 → NP_001321324.1  Target of Myb protein 1 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WPY9, A0A1P8AQI5

    3. NM_001334752.1 → NP_001321321.1  Target of Myb protein 1 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O49283, Q6NQK0
      UniProtKB/TrEMBL
      A0A178WMY8
      Conserved Domains (2) summary
      cd03561
      Location:10 → 135
      VHS; VHS domain family; The VHS domain is present in Vps27 (Vacuolar Protein Sorting), Hrs (Hepatocyte growth factor-regulated tyrosine kinase substrate) and STAM (Signal Transducing Adaptor Molecule). It has a superhelical structure similar to that of the ...
      cd14231
      Location:180 → 258
      GAT_GGA_like_plant; GAT domain found in uncharacterized Golgi-localized gamma ear-containing Arf-binding protein (GGA)-like proteins mainly found in plants

    4. NM_001334751.1 → NP_001321325.1  Target of Myb protein 1 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O49283, Q6NQK0
      UniProtKB/TrEMBL
      A0A178WMY8
      Conserved Domains (2) summary
      cd03561
      Location:10 → 135
      VHS; VHS domain family; The VHS domain is present in Vps27 (Vacuolar Protein Sorting), Hrs (Hepatocyte growth factor-regulated tyrosine kinase substrate) and STAM (Signal Transducing Adaptor Molecule). It has a superhelical structure similar to that of the ...
      cd14231
      Location:180 → 258
      GAT_GGA_like_plant; GAT domain found in uncharacterized Golgi-localized gamma ear-containing Arf-binding protein (GGA)-like proteins mainly found in plants

    5. NM_001334754.1 → NP_001321322.1  Target of Myb protein 1 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WPY9, A0A1P8AQI3

    6. NM_001334755.1 → NP_001321323.1  Target of Myb protein 1 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O49283, Q6NQK0
      UniProtKB/TrEMBL
      A0A178WMY8
      Conserved Domains (2) summary
      cd03561
      Location:10 → 135
      VHS; VHS domain family; The VHS domain is present in Vps27 (Vacuolar Protein Sorting), Hrs (Hepatocyte growth factor-regulated tyrosine kinase substrate) and STAM (Signal Transducing Adaptor Molecule). It has a superhelical structure similar to that of the ...
      cd14231
      Location:180 → 258
      GAT_GGA_like_plant; GAT domain found in uncharacterized Golgi-localized gamma ear-containing Arf-binding protein (GGA)-like proteins mainly found in plants

    7. NM_001334756.1 → NP_001321326.1  Target of Myb protein 1 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WPY9, A0A1P8AQI5
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q6NQK0.1

    Gene LinkOut

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