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    AP19 associated protein 19 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816245, updated on 18-Sep-2024

    Summary

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    Official Symbol
    AP19
    Official Full Name
    associated protein 19
    Primary source
    TAIR:AT2G17380
    Locus tag
    AT2G17380
    See related
    Araport:AT2G17380
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    associated protein 19; CLATHRIN ASSEMBLY PROTEIN AP19; F5J6.14; F5J6_14
    Summary
    Encodes clathrin assembly protein AP19.
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    Genomic context

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    See AP19 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    7
    Sequence:
    Chromosome: 2; NC_003071.7 (7552992..7555163)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Ribosomal protein S4 (RPS4A) family protein Neighboring gene 3-hydroxy-3-methylglutaryl-CoA reductase 2 Neighboring gene ankyrin repeat-containing 2B Neighboring gene ARID/BRIGHT DNA-binding domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_127293.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables clathrin adaptor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of AP-1 adaptor complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in Golgi apparatus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    associated protein 19
    NP_565415.1
    • associated protein 19 (AP19); FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, transport, vesicle-mediated transport, protein transport; LOCATED IN: membrane coat, mitochondrion, clathrin vesicle coat, clathrin coat of trans-Golgi network vesicle, clathrin adaptor complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor AP1, sigma subunit (InterPro:IPR015604), Adaptor protein complex, sigma subunit (InterPro:IPR016635), Clathrin adaptor, sigma subunit/coatomer, zeta subunit (InterPro:IPR000804), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: Clathrin adaptor complex small chain family protein (TAIR:AT4G35410.2); Has 1854 Blast hits to 1853 proteins in 251 species: Archae - 0; Bacteria - 0; Metazoa - 748; Fungi - 497; Plants - 257; Viruses - 0; Other Eukaryotes - 352 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      7552992..7555163
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_127293.3 → NP_565415.1  associated protein 19 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565415.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O24611, Q8LEZ8
      UniProtKB/TrEMBL
      A0A178W2P0, A0A5S9WYU2, A0A654F4E6
      Conserved Domains (1) summary
      cd14831
      Location:3 → 143
      AP1_sigma; AP-1 complex subunit sigma
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8LEZ8.1

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