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    HOS10 high response to osmotic stress 10 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 840446, updated on 18-Sep-2024

    Summary

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    Official Symbol
    HOS10
    Official Full Name
    high response to osmotic stress 10
    Primary source
    TAIR:AT1G35515
    Locus tag
    AT1G35515
    See related
    Araport:AT1G35515
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    high response to osmotic stress 10; MYB8
    Summary
    Encodes a nuclear localized R2R3-type MYB transcription factor that is involved in responses to abiotic stress including cold acclimation,osmotic and salt stress.Mutants are sensitive to salt, freezing and osmotic stress.
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    Genomic context

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    See HOS10 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (13077890..13080265)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene O-fucosyltransferase family protein Neighboring gene miscRNA Neighboring gene myb-like transcription factor family protein Neighboring gene auxin response factor 15 Neighboring gene DEAD/DEAH box RNA helicase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Transcription factor MYB8 regulates iron deficiency stress response in Arabidopsis. Gong Q, et al. Plant Sci, 2024 Mar. PMID 38211736
    2. CrY2H-seq: a massively multiplexed assay for deep-coverage interactome mapping. Wanamaker SA, et al. Nat Methods, 2017 Aug. PMID 28650476, Free PMC Article
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Transcription factor MYB8 regulates iron deficiency stress response in Arabidopsis.
      Title: Transcription factor MYB8 regulates iron deficiency stress response in Arabidopsis.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_179418.2

    Gene Ontology Provided by TAIR

    Process Evidence Code Pubs
    involved_in response to iron ion starvation IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    high response to osmotic stress 10
    NP_849749.1
    • high response to osmotic stress 10 (HOS10); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 6 (TAIR:AT4G09460.1); Has 8926 Blast hits to 8306 proteins in 471 species: Archae - 0; Bacteria - 0; Metazoa - 693; Fungi - 424; Plants - 6065; Viruses - 3; Other Eukaryotes - 1741 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      13077890..13080265
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_179418.2 → NP_849749.1  high response to osmotic stress 10 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_849749.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LQE2, Q9SDS8
      UniProtKB/TrEMBL
      A0A654EGP8
      Conserved Domains (1) summary
      PLN03091
      Location:1 → 131
      PLN03091; hypothetical protein; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SDS8.1

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