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    scpl44 serine carboxypeptidase-like 44 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 840974, updated on 18-Sep-2024

    Summary

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    Official Symbol
    scpl44
    Official Full Name
    serine carboxypeptidase-like 44
    Primary source
    TAIR:AT1G43780
    Locus tag
    AT1G43780
    See related
    Araport:AT1G43780
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F28H19.5; F28H19_5; serine carboxypeptidase-like 44
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    Genomic context

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    See scpl44 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    9
    Sequence:
    Chromosome: 1; NC_003070.9 (16563811..16567399)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene ncRNA Neighboring gene miscRNA Neighboring gene pseudo Neighboring gene tracheary element differentiation-related 6

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables serine-type carboxypeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    serine carboxypeptidase-like 44
    NP_175046.1
    • serine carboxypeptidase-like 44 (scpl44); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 42 (TAIR:AT5G42240.1); Has 3772 Blast hits to 3711 proteins in 431 species: Archae - 0; Bacteria - 430; Metazoa - 636; Fungi - 862; Plants - 1455; Viruses - 0; Other Eukaryotes - 389 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      16563811..16567399
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_103506.1 → NP_175046.1  serine carboxypeptidase-like 44 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_175046.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9MAR8
      UniProtKB/TrEMBL
      A0A178WN63, A0A5S9WJC3
      Conserved Domains (1) summary
      pfam00450
      Location:42 → 466
      Peptidase_S10; Serine carboxypeptidase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9MAR8.1

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