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    SNRK2-8 Protein kinase superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 844164, updated on 18-Sep-2024

    Summary

    Official Symbol
    SNRK2-8
    Official Full Name
    Protein kinase superfamily protein
    Primary source
    TAIR:AT1G78290
    Locus tag
    AT1G78290
    See related
    Araport:AT1G78290
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    SNF1-RELATED PROTEIN KINASE 2-8; SNF1-RELATED PROTEIN KINASE 2.8; SNF1-RELATED PROTEIN KINASE 2C; SNRK2.8; SRK2C
    Summary
    encodes a member of SNF1-related protein kinase (SnRK2) family whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress and dehydration.
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    Genomic context

    See SNRK2-8 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    7
    Sequence:
    Chromosome: 1; NC_003070.9 (29457205..29459493, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene RNA-binding (RRM/RBD/RNP motifs) family protein Neighboring gene ncRNA Neighboring gene UDP-glucosyl transferase 85A4 Neighboring gene transferases, transferring glycosyl groups Neighboring gene ncRNA Neighboring gene general regulatory factor 2

    Bibliography

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    NM_001084370.2
    NM_202441.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within response to osmotic stress IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    Protein kinase superfamily protein
    NP_001077839.1
    • Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: response to karrikin; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G33950.1); Has 112604 Blast hits to 110873 proteins in 3029 species: Archae - 114; Bacteria - 13128; Metazoa - 41421; Fungi - 12195; Plants - 25871; Viruses - 459; Other Eukaryotes - 19416 (source: NCBI BLink).
    NP_974170.1
    • Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: response to karrikin; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G33950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      29457205..29459493 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001084370.2NP_001077839.1  Protein kinase superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001077839.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8L8P8, Q9M9E9
      UniProtKB/TrEMBL
      A0A178W6S8, A0A5S9WVF2
      Conserved Domains (1) summary
      cd14662
      Location:3259
      STKc_SnRK2; Catalytic domain of the Serine/Threonine Kinases, Sucrose nonfermenting 1-related protein kinase subfamily 2
    2. NM_202441.3NP_974170.1  Protein kinase superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974170.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8L8P8, Q9M9E9
      UniProtKB/TrEMBL
      A0A178W6S8, A0A5S9WVF2
      Conserved Domains (1) summary
      cd14662
      Location:3259
      STKc_SnRK2; Catalytic domain of the Serine/Threonine Kinases, Sucrose nonfermenting 1-related protein kinase subfamily 2