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    GA20OX5 gibberellin 20-oxidase 5 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841012, updated on 18-Sep-2024

    Summary

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    Official Symbol
    GA20OX5
    Official Full Name
    gibberellin 20-oxidase 5
    Primary source
    TAIR:AT1G44090
    Locus tag
    AT1G44090
    See related
    Araport:AT1G44090
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARABIDOPSIS THALIANA GIBBERELLIN 20-OXIDASE 5; ATGA20OX5; gibberellin 20-oxidase 5; T7O23.20; T7O23_20
    Summary
    Encodes a gibberellin 20-oxidase.
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    Genomic context

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    See GA20OX5 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (16760616..16762486, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene glycine-rich protein Neighboring gene amino acid permease 5 Neighboring gene ncRNA Neighboring gene Cyclin A1;1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The gibberellin biosynthetic genes AtGA20ox1 and AtGA20ox2 act, partially redundantly, to promote growth and development throughout the Arabidopsis life cycle. Rieu I, et al. Plant J, 2008 Feb. PMID 18069939
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables gibberellin 20-oxidase activity TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in gibberellin biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within gibberellin biosynthetic process TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    gibberellin 20-oxidase 5
    NP_175075.1
    • gibberellin 20-oxidase 5 (GA20OX5); CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 20-oxidase 3 (TAIR:AT5G07200.1); Has 8296 Blast hits to 8263 proteins in 963 species: Archae - 0; Bacteria - 1043; Metazoa - 120; Fungi - 995; Plants - 4852; Viruses - 0; Other Eukaryotes - 1286 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      16760616..16762486 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_103535.2 → NP_175075.1  gibberellin 20-oxidase 5 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_175075.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q4PT02, Q9C6Y1, Q9LNY5
      UniProtKB/TrEMBL
      A0A178WC38, A0A5S9WK03
      Conserved Domains (3) summary
      PLN02276
      Location:24 → 383
      PLN02276; gibberellin 20-oxidase
      pfam03171
      Location:228 → 324
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily
      pfam14226
      Location:63 → 160
      DIOX_N; non-haem dioxygenase in morphine synthesis N-terminal
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q4PT02.1

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