Flavodoxin family protein [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Official Full Name: Flavodoxin family protein
Primary source: TAIR:AT3G02280
Locus tag: AT3G02280
See related: Araport:AT3G02280
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: AtTAH18; F14P3.7; F14P3_7; TAH18
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Genomic context

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See in Genome Data Viewer

Location:: chromosome: 3

Exon count:: 12

Sequence:: Chromosome: 3; NC_003074.8 (453329..457869)

Chromosome 3 - NC_003074.8 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

ATR3 belongs to the NR1 subfamily of diflavin reductases whose characterized members are involved in essential cellular functions. [ATR3]
Title: ATR3 encodes a diflavin reductase essential for Arabidopsis embryo development.

Submit: New GeneRIF Correction

Pathways from PubChem

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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NM_001337392.1

Supported by ESTs:

NM_111095.5

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables NADPH-hemoprotein reductase activity	IEA Inferred from Electronic Annotation more info
enables oxidoreductase activity, acting on NAD(P)H	IDA Inferred from Direct Assay more info	PubMed
enables protein binding	IPI Inferred from Physical Interaction more info	PubMed

Process	Evidence Code	Pubs
involved_in embryo development ending in seed dormancy	IMP Inferred from Mutant Phenotype more info	PubMed

Component	Evidence Code	Pubs
located_in cytoplasm	IDA Inferred from Direct Assay more info	PubMed
located_in nucleus	IDA Inferred from Direct Assay more info	PubMed

General protein information

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Preferred Names: Flavodoxin family protein

NP_186877.2

Flavodoxin family protein; FUNCTIONS IN: oxidoreductase activity, FMN binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), FAD-binding, type 1 (InterPro:IPR003097), Flavodoxin/nitric oxide synthase (InterPro:IPR008254), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709); BEST Arabidopsis thaliana protein match is: P450 reductase 1 (TAIR:AT4G24520.1); Has 7053 Blast hits to 6598 proteins in 1587 species: Archae - 9; Bacteria - 3832; Metazoa - 1042; Fungi - 865; Plants - 492; Viruses - 0; Other Eukaryotes - 813 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003074.8 Reference assembly

Range

453329..457869

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_001337391.1 → NP_001327241.1 Flavodoxin family protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/Swiss-Prot

A0A1I9LRQ3, Q6NPS8, Q9SRU4

UniProtKB/TrEMBL

A0A178VD19, A0A654FDV5

Conserved Domains (2) summary

cd06207
Location:227 → 622

CyPoR_like; NADPH cytochrome p450 reductase (CYPOR) serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases. CYPOR transfers two electrons from NADPH to the heme of cytochrome p450 via ...

pfam00258
Location:10 → 148

Flavodoxin_1
NM_111095.5 → NP_186877.2 Flavodoxin family protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_186877.2

Status: REVIEWED

UniProtKB/Swiss-Prot

A0A1I9LRQ3, Q6NPS8, Q9SRU4

UniProtKB/TrEMBL

A0A178VD19, A0A654FDV5

Conserved Domains (2) summary

cd06207
Location:227 → 622

CyPoR_like; NADPH cytochrome p450 reductase (CYPOR) serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases. CYPOR transfers two electrons from NADPH to the heme of cytochrome p450 via ...

pfam00258
Location:10 → 148

Flavodoxin_1
NM_001337392.1 → NP_001327242.1 Flavodoxin family protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/Swiss-Prot

A0A1I9LRQ3, Q6NPS8, Q9SRU4

UniProtKB/TrEMBL

A0A178VD19, A0A654FDV5

Conserved Domains (2) summary

cd06207
Location:227 → 622

CyPoR_like; NADPH cytochrome p450 reductase (CYPOR) serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases. CYPOR transfers two electrons from NADPH to the heme of cytochrome p450 via ...

pfam00258
Location:10 → 148

Flavodoxin_1